Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2602 ATGACTGGTTCGCGCAGAGGCAATGGCGATGGCGGGGAAAATGTGAGGAAAGCGGCGAGCGAGCAGAACCCGGCCACTCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATCTCATCAATGAGAAAAGAGATGATTTGATGAACACGGAGTCTGACAAGTTCGACACCATCTTGGATGAGTTCGACAAGTTACACGTCCAAGTTGAGAAGCCGAGGGAGCAAGTTGCAGATGCAGAGGCACTGCTGGATCTCACACGCACTCTAGTGGGATCTGTTAAGTCGTTGGCGAACGAGGGTGTGACCCCTTCTCAATTTGTTTCATCTTTGCTCATACGCTACGCCCATACCCAACACTCTATTGATTGGCACAAACTTGGCCTTGCCGCCTCCCCAATCTTCCTCTCCGTTCATGGCTCTTCTACCATGCTTGGTCCCATGGACAACCAGTTTAAGCAACGCAAAATGGGAGTGCGCAGGAACCGTGATCCTCGTCAAATTGCAACTACTAGACCTCAACAGCTTGATGAGGCTGTTACAGAGGAAAAAACTGATACCGACAAAAACATGGCCACTATGTTTCACATCTTAAGGAGGACAAAGCGTGTCCCACTTGAAAATTTAATTTTGAACAGGGAGTCTTTTGCTCAGAGTGTGGAAAACTTGTTTGCCCTATCATTCCTAGTGAAAGATGGCCGTGCTGAGATCAGCCTTGATGAAAATCGCTTGCACTATGTTTCACCTAAAAATGCTCCAGCTGCCAACTTGGTATCATCAAAAGAAGTTTCTTATACTCATTTTGTATTCAGATATGATTACCAAGATTGGAAGTTAATGAAAGATGTGGTGCCTGATGGAAAAGAATTAATGCCTCAACGGACTCAAATTTGCACTGTAGTTGCATCTCAAGAAGGAATGGGTGGTGATGATTCCCAACCTGCTTTGGCTGTAACACCCATCAGGAAGCTATCACGGAACCGAGGTCGGGTTGTGCAGGAGGAAGGTGTTGTAGAAGAATCTCCTGAATGTGATGAGGAAAATGCTTCCAGAGCAGGGGCAATTCGTAGGTGTAAGCGTAGGCTTCGTTAA 1092 0.4689 MTGSRRGNGDGGENVRKAASEQNPATRRVIRSQFLQLKNLINEKRDDLMNTESDKFDTILDEFDKLHVQVEKPREQVADAEALLDLTRTLVGSVKSLANEGVTPSQFVSSLLIRYAHTQHSIDWHKLGLAASPIFLSVHGSSTMLGPMDNQFKQRKMGVRRNRDPRQIATTRPQQLDEAVTEEKTDTDKNMATMFHILRRTKRVPLENLILNRESFAQSVENLFALSFLVKDGRAEISLDENRLHYVSPKNAPAANLVSSKEVSYTHFVFRYDYQDWKLMKDVVPDGKELMPQRTQICTVVASQEGMGGDDSQPALAVTPIRKLSRNRGRVVQEEGVVEESPECDEENASRAGAIRRCKRRLR* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2602 363 Pfam Nse4 C-terminal 204 286 IPR014854 -
Gso10g2602 363 MobiDBLite consensus disorder prediction 1 26 - -
Gso10g2602 363 PANTHER UNCHARACTERIZED 20 362 IPR027786 GO:0005634|GO:0006281|GO:0030915
Gso10g2602 363 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 20 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2602 Gso-Chr10 52933908 52936539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2602 27 362 Non-SMC Element family AT1G51130 50.862 1.58e-113 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2602 K22825 - gmx:100792117 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g2022 20 50761554 50763895 Gso10g2602 10 52933908 52936539 GST