Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2596 ATGGACCGCAGAGTCTATCACCATCGTCCTGCTCCTCCGGCACATGCTTCTCCCCCTGAATACTTTGTCCTCCAGGGGAACACAACTTATAAAGACGATCTATATTTAAGGAAGAGGACAGGGATGCGTCGGTGGCTTTGTTGCACATGTGAGGTGGAAGAGTCTTACCCATCAAATGAAAATGAGCACCTGAAAAGCCCAAGGAATTATGGAGATGGAAATCAAAAAGGCTCAAAGGTGTCAGCTCCTGTCAAGCCTGAAACACAAAAGGCACCTCCACCTATTGAAGCTCCAGCCTTATCTTTAGATGAGCTGAAGGAGAAGACAGACAACTTTGGTTCAAAGGCATTAATAGGTGAAGGATCGTATGGAAGGGTGTATTATGCAACCTTAAACAATGGAAAAGCAGTGGCTGTGAAAAAGCTTGATGTTTCATCTGAACCTGAATCAAATAATGAGTTTTTGACCCAGGTTTCCATGGTCTCAAGATTGAAGAATGGCAATTTTGTTGAGTTGCATGGTTACTGTGTTGAAGGAAATCTTCGTGTACTTGCATATGAGTTTGCTACTATGGGCTCTCTTCATGACATATTGCACGGTAGAAAGGGAGTTCAAGGTGCTCAACCAGGACCAACTCTTGATTGGATACAGCGAGTTAGAATTGCAGTTGATGCTGCTCGGGGATTGGAATATTTACATGAGAAAGTTCAACCACCGATTATACACAGGGATATCAGATCAAGTAATGTGCTAATCTTTGAAGATTACAAGGCCAAGATAGCCGACTTTAACCTTTCTAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCAACTCGTGTATTGGGAACTTTTGGGTATCATGCTCCAGAATATGCAATGACTGGGCAGTTGACTCAAAAAAGTGATGTCTATAGTTTTGGTGTGGTTCTTCTTGAGCTTCTTACTGGCAGAAAACCTGTTGACCATACCATGCCTAGAGGACAGCAGAGTCTTGTCACATGGGCTACTCCAAGATTAAGTGAAGATAAAGTGAAACAGTGCGTTGACCCAAAACTGAAGGGAGAATACCCCCCTAAAGGGGTTGCTAAGCTTGCAGCTGTTGCGGCGCTGTGCGTGCAGTATGAAGCTGAGTTTAGGCCAAATATGAGCATTGTTGTTAAAGCACTCCAACCACTTCTGAAGTCTCCCGCTCCTGCTGCTCCAGAAAGTTGA 1215 0.4436 MDRRVYHHRPAPPAHASPPEYFVLQGNTTYKDDLYLRKRTGMRRWLCCTCEVEESYPSNENEHLKSPRNYGDGNQKGSKVSAPVKPETQKAPPPIEAPALSLDELKEKTDNFGSKALIGEGSYGRVYYATLNNGKAVAVKKLDVSSEPESNNEFLTQVSMVSRLKNGNFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWIQRVRIAVDAARGLEYLHEKVQPPIIHRDIRSSNVLIFEDYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKSPAPAAPES* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2596 404 ProSitePatterns Tyrosine protein kinases specific active-site signature. 240 252 IPR008266 GO:0004672|GO:0006468
Gso10g2596 404 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 28 403 - -
Gso10g2596 404 Gene3D Transferase(Phosphotransferase) domain 1 190 400 - -
Gso10g2596 404 MobiDBLite consensus disorder prediction 1 20 - -
Gso10g2596 404 SUPERFAMILY Protein kinase-like (PK-like) 92 390 IPR011009 -
Gso10g2596 404 SMART tyrkin_6 112 390 IPR020635 GO:0004713|GO:0006468
Gso10g2596 404 ProSiteProfiles Protein kinase domain profile. 112 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2596 404 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 ISOFORM X2 28 403 - -
Gso10g2596 404 Pfam Protein tyrosine and serine/threonine kinase 117 390 IPR001245 GO:0004672|GO:0006468
Gso10g2596 404 Gene3D Phosphorylase Kinase; domain 1 77 188 - -
Gso10g2596 404 MobiDBLite consensus disorder prediction 57 96 - -
Gso10g2596 404 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2596 Gso-Chr10 52888907 52893843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2596 46 391 Receptor kinase-like Gene Family AT4G02010 46.418 3.90e-93 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Gso10g2596 PK_Tyr_Ser-Thr 9.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2596 K13436 - gmx:100790016 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g2009 20 50679370 50683867 Gso10g2596 10 52888907 52893843 GST