Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2590 ATGGCCTTAAATTCTCCAAACTCCAGCAACTTTAGCACTGCCCTCTCTCTTGGGTCGGCTTCCAACACCAACGAAGCCTTAACGGTGAAAGGAATGGGCCAACTAGGGTTGAACCAAAGGATCACTAAGGTGAGAAAATCCTCATTGACCGCAAAAGAAAGATCGTGTCTGGTTCATGGTGGCAGTGAAAACAACACTGAGAGTATCATAAGAGCAAGTCAGATTGTAAGAGCCCAACTGGTGCATGCAGTATCATCAACACCCTCCCCAGTTTCCAGTAATAATGTTGTTGTTGTTGTTGCGGACAAAAAGAAAGCCATCGAGATTCTGCAGGCCAAACTTCTCTGCGCCTCAGCATTTGCTCCTAAAACTAGTCCCACATCGCTCAGGCCAATTAGCCTTAGCCACCGTTTAACTTCAACGCCCCCACTCAAAACGCGTCGTGGTTTTCTTAATGACGATGATTTTGCTTATTCTCTTTGTCCCTCTCCGCTGTCTGTTTGTTTTCCCCATGAAACCAGTACCTTGCAGAATCATGTTCGTGGCGGCGACACCAAGTACGATGGTCGGATGCATAGCTATCCGTACAAGAAAAATGGGCCCTACACGTGTCCCAAGTGCGGGCACGTGTTTGAGACGTCGCAGCGGTTTGCGGCGCACGTGAGTTCGAGTCACTACAAGTACGAGACCAAGAGTGAGAGAAAGAAGAGACTCATGGCCAAAATCCGAAAGAGAAATCTCCGTATAGAATGGGTAAGTGGTGGACTCACTGTTGTTCCTGACGATGCTCCTCCTACTAGTGCTTTTGCTTATTCGGCACGAAACAACAACAACGTTGCTCCTCCACCTCCTGTTAGGGTGGTGAAGGTTGAAGGTCAGAGTGGTATGGAGCTTCAGCTTGCTCCTCCTCCTGGATGGGAAAAATTAACTGCTGGAGGTGGAGCTGTTAAAATCAAATTGGAGCCTGTAGCTAGCTAG 978 0.4816 MALNSPNSSNFSTALSLGSASNTNEALTVKGMGQLGLNQRITKVRKSSLTAKERSCLVHGGSENNTESIIRASQIVRAQLVHAVSSTPSPVSSNNVVVVVADKKKAIEILQAKLLCASAFAPKTSPTSLRPISLSHRLTSTPPLKTRRGFLNDDDFAYSLCPSPLSVCFPHETSTLQNHVRGGDTKYDGRMHSYPYKKNGPYTCPKCGHVFETSQRFAAHVSSSHYKYETKSERKKRLMAKIRKRNLRIEWVSGGLTVVPDDAPPTSAFAYSARNNNNVAPPPPVRVVKVEGQSGMELQLAPPPGWEKLTAGGGAVKIKLEPVAS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2590 325 ProSitePatterns Zinc finger C2H2 type domain signature. 204 225 IPR013087 -
Gso10g2590 325 ProSiteProfiles Zinc finger C2H2 type domain profile. 202 230 IPR013087 -
Gso10g2590 325 SMART c2h2final6 202 225 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2590 160 280 C2H2 Transcription Factor Family AT5G22990 36.585 1.14e-22 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gso10g2590 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2590 - - gmx:100788426 599.742