Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2582 ATGCCAGAGCTTCGTAGTGGTGTGCGACGGGGGCGTGGCCGTGGCCAGAAAGCATCGGAACCTGCAAGGAAGGAGGTGAAGGCTCGTGCGGCGCCGAGAGGGAGACCCAGGACTCGATTGGCGGCGAAGGAATTGGAGCTTCAGGAGCCGTTGATCCCGATACCACCGACACCGATACCGGAACCGTTGATCCCGATACTGGAGCCGGCGAAAGAAGAGAAAAAGGAAGTTGGTGTGGGCGTGAATATGGGTGACGAAAGCGGTGGCTTGAGTGGCAATAAGCCTGAGGAGGATGCCACCACTCCACCTTTTCCTGATAGGGTTCAAGTGGGAGGATCGCCCATGTACAAGGTAGAGAGAAAATTGGGTAAAGGTGGATTTGGTCAGGTTTTTGTTGGCCGTCGTGAGCGTGCAACAGGTGCTGGAGCTATGGAGGTGGCTCTGAAATTTGAACATAGAAACAGTAAGGGCTGTAACTATGGCCCTCCTTACGAGTGGCAAGTATACAACACCCTTGGGGGTAGTTATGGAATCCCAAAAGTACACTATAAAGGAAGACAAGGAGAATATTATGTGATGGTTATGGACATACTTGGTCCAAGTTTGTGGGATCTCTGGAATACCTCAAGCCAGATGATGTCTTCTGAAATGGTCTCATGTATAGCGGTTGAGTCCTTATCAATACTTGAGAAGATGCACTCAAAAGGTTATGTGCATGGGGATGTAAAACCAGAAAACTTTTTACTTGGTCAACCAGCTACAGCGCAAGAGAAGAAACTGTTTCTTGTTGACCTTGGATTAGCAACAAAATGGAGAGACACCTCCAGTGGACAGCATGTGGACTATGATCAACGTCCTGATATGTTTAGAGGAACTGTTCGATATGCTAGTGTTCATGCTCATTTGGGGAGAACTGCTAGTAGAAGAGATGATCTTGAATCTCTTGCATACACACTAGTCTTCCTCCATAAGGGCCGATTACCATGGCAAGGTTACCAGGGTGATAGCAAATCCTTCCTTGTTTGCAAAAAGAAGATGGGGACATCTCCTGAGACGCTATGCTGCTTGTGTCCTCCTCCTTTTAGGCATTTTCTTGAGATTGTAGTGAATATGAAATTTGATGAAGAACCTAATTATTCCAAGCTAATATCTTTGTTTGATGGTACGATTGGACCCAATCCAGCATTGCGGCCAATTAATACTGAAGGTGCCCAAAAGGTTGGGCAAAAGCGGGGTAGATTGAATGTTGAAGATGATGAATCACAGCCAAGAAAGAAGGTCCGTTTAGGGGTTCCTGCTACACAATGGATTTCAATTTACAATGCAAGACTGCCAATGAAACAAAGGTACCATTATAATGTGTCTGATGCAAGATTAGAACAGCATGTTGAGAGAGGGGTTGCAGATGGCCTTCTTATTAGTTGTGTGTCTTCTTGTTGCAATCTTTGGGCTCTTATTATGGATGCTGGAACTGGTTTTACAGCTCAAGTTTACAAGTTGTCAACCTTTTTCTTGCACAAGGAATGGATAATGGAGCAGTGGGATAAAAACTTTTACATTACTTCTATTGCAGGGAGCAACAATGGCAGCTCTCTTGTGGTGATGTCAAAAGGTACGCAGTATACTCAACAGTCCTACAAAGTGAGTGAATCTTTCCCCTTCAAATGGATAAACAAGAAGTGGAGAGAAGGTTTTCATGTCACTTCAATGGCCACTGCTGGAAGTCGTTGGGGTGTTGTTATGTCTCGAAATGCTGGATTCAGTAAACAGGTGGTTGAACTTGATTTTCTCTATCCAAGTGAGGGCATCCATAAACGTTGGGATAAAGGTTATAGGATTACAGCAACCGCAGCTACATTGGATCAATCTGCTCTTATATTAAGTATTCCGAGACGCAAACTCAGTGATGAAACTCAGGAAACTTTACGGACGTCACAATTTCCCAGCACGCATGTTAAGGACAAATGGTCAAAAAACCTTTACCTTGCCTGTTTGTGCTACGGACGCACAGTATGCTGA 2019 0.4507 MPELRSGVRRGRGRGQKASEPARKEVKARAAPRGRPRTRLAAKELELQEPLIPIPPTPIPEPLIPILEPAKEEKKEVGVGVNMGDESGGLSGNKPEEDATTPPFPDRVQVGGSPMYKVERKLGKGGFGQVFVGRRERATGAGAMEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSYGIPKVHYKGRQGEYYVMVMDILGPSLWDLWNTSSQMMSSEMVSCIAVESLSILEKMHSKGYVHGDVKPENFLLGQPATAQEKKLFLVDLGLATKWRDTSSGQHVDYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLVFLHKGRLPWQGYQGDSKSFLVCKKKMGTSPETLCCLCPPPFRHFLEIVVNMKFDEEPNYSKLISLFDGTIGPNPALRPINTEGAQKVGQKRGRLNVEDDESQPRKKVRLGVPATQWISIYNARLPMKQRYHYNVSDARLEQHVERGVADGLLISCVSSCCNLWALIMDAGTGFTAQVYKLSTFFLHKEWIMEQWDKNFYITSIAGSNNGSSLVVMSKGTQYTQQSYKVSESFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNAGFSKQVVELDFLYPSEGIHKRWDKGYRITATAATLDQSALILSIPRRKLSDETQETLRTSQFPSTHVKDKWSKNLYLACLCYGRTVC* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2582 672 PANTHER CASEIN KINASE-RELATED 70 645 - -
Gso10g2582 672 CDD STKc_CK1 115 386 - -
Gso10g2582 672 Gene3D Transferase(Phosphotransferase) domain 1 96 428 - -
Gso10g2582 672 ProSitePatterns Protein kinases ATP-binding region signature. 122 149 IPR017441 GO:0005524
Gso10g2582 672 Pfam Protein kinase domain 116 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2582 672 SMART serkin_6 116 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2582 672 ProSiteProfiles Protein kinase domain profile. 116 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2582 672 MobiDBLite consensus disorder prediction 84 111 - -
Gso10g2582 672 MobiDBLite consensus disorder prediction 1 64 - -
Gso10g2582 672 PANTHER CASEIN KINASE I-LIKE PROTEIN 70 645 - -
Gso10g2582 672 MobiDBLite consensus disorder prediction 1 44 - -
Gso10g2582 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Gso10g2582 672 SUPERFAMILY Protein kinase-like (PK-like) 116 392 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2582 Gso-Chr10 52739472 52744846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2582 86 344 AGC Kinase Gene Family AT3G08730 23.106 2.21e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Gso10g2582 Pkinase 2.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2582 - - gmx:100783819 1316.98