Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2561 ATGATCTCAAACTCGGACCCCGTAGAACCAGTCACGGCAACCGCCACCGCCACCGCCGGCGCCGACGACGCCACCGTCTCAACAACCGCCTCTTCTTCCAATGAAGATCAGCCTGCACCGCCGGCGGCACCAAACATTGTGATGTCCTCCAAGGATCACGATTCTCTCTTCAGCGGTGGCGGCATCAGCTTTCTCTCTGGAAGCCGAAATGGAAGGTTCAGCTATGGATATTCCAGTTTCAAGGGTAAAAGGTCATCAATGGAGGATTTCTTTGAGACCAAAATATCAGAGGTTGATGGTCAGACAGTTGCGTTTTTTGGTGTTTTCGATGGTCACGGAGGTTCCCGGACTGCAGAATATCTGAAAAACAATCTGTTTAAGAATTTGAGTAGCCACCCTAACTTTATCAAAGACACAAAGACTGCTATAGTTGAAGCATTTAAACAGACAGATGTTGACTACCTCAATGAGGAAAAGAGGCATCAAAGGGATGCTGGGTCAACTGCATCAACAGCTATGTTGTTGGGGGACCGGATTGTTGTTGCAAATGTTGGTGATTCCAGAGTGGTTGCATCTAGAGCTGGTTCAGCTATTCCTTTGTCTATCGATCACAAACCTGATAGATCTGATGAACGTCGAAGGATTGAACAGGCTGGGGGATTCATAATTTGGGCTGGAACATGGAGAGTTGGTGGTGTTCTTGCTGTTTCCCGTGCGTTTGGAGACAAATTTCTTAAGCCCTATGTTGTTGCTGACCCAGAAATTCAGGAGGAAGAAATTAACGGAGTTGATTTTATTATAATTGCTAGTGATGGCCTCTGGAATGTCATATCAAACAAGGAGGCCGTGTCTTTAGTACAAAATATCACAGATGCAGAAGTGGCGTCCAGAGAACTTATAAAAGAAGCTTATGCACGAGGAAGCTCAGATAACATCACCTGTGTTGTTGTTCGATTTGATCTATCCTGA 969 0.4582 MISNSDPVEPVTATATATAGADDATVSTTASSSNEDQPAPPAAPNIVMSSKDHDSLFSGGGISFLSGSRNGRFSYGYSSFKGKRSSMEDFFETKISEVDGQTVAFFGVFDGHGGSRTAEYLKNNLFKNLSSHPNFIKDTKTAIVEAFKQTDVDYLNEEKRHQRDAGSTASTAMLLGDRIVVANVGDSRVVASRAGSAIPLSIDHKPDRSDERRRIEQAGGFIIWAGTWRVGGVLAVSRAFGDKFLKPYVVADPEIQEEEINGVDFIIIASDGLWNVISNKEAVSLVQNITDAEVASRELIKEAYARGSSDNITCVVVRFDLS* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2561 322 Pfam Protein phosphatase 2C 75 312 IPR001932 -
Gso10g2561 322 Gene3D - 67 321 IPR036457 -
Gso10g2561 322 SUPERFAMILY PP2C-like 67 320 IPR036457 -
Gso10g2561 322 ProSitePatterns PPM-type phosphatase domain signature. 105 113 IPR000222 GO:0043169
Gso10g2561 322 PANTHER ALPHABET, ISOFORM E-RELATED 38 322 - -
Gso10g2561 322 CDD PP2Cc 73 319 IPR001932 -
Gso10g2561 322 PANTHER PROTEIN PHOSPHATASE 2C 11-RELATED 38 322 - -
Gso10g2561 322 SMART PP2C_4 63 317 IPR001932 -
Gso10g2561 322 ProSiteProfiles PPM-type phosphatase domain profile. 74 319 IPR001932 -
Gso10g2561 322 MobiDBLite consensus disorder prediction 1 39 - -
Gso10g2561 322 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2561 Gso-Chr10 52558204 52564362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2561 46 322 PP2C-type Phosphatase Gene Family AT1G43900 72.924 6.79e-155 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2561 K17506 - gmx:100776867 595.504