Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2536 ATGGAAGAGATGTCGGGTTTAGCAACAGCAATAAACTCTTCCAACATAGGATTTCAGCTATTGAAGAAGCATGGGTGGAAAGAAGGGACTGGTCTTGGAGTCTCTGAGCAGGGTAGGTTAGAACCTGTGGAGACTCATGTAAAGAATAATAAACGAGGTTTGGGAGCAGATAAAGCGAAGAAAAAGGTTGTCAAAGCAAAACCTGATCAAAGCGATTCCTCTAAAGGGAACAATCAGCAGGATCATTTACCTCAAAAGAAAAGCAAAACACTTTCTAAACGGATGAGAAAGATGCAGGAATTTGAAAAGAAGATGCGAGAGAAGGAATTTGAGCGTGCTTTCTTCAGAGAGTTCTGGCCAGAAAATGTGTAA 372 0.4113 MEEMSGLATAINSSNIGFQLLKKHGWKEGTGLGVSEQGRLEPVETHVKNNKRGLGADKAKKKVVKAKPDQSDSSKGNNQQDHLPQKKSKTLSKRMRKMQEFEKKMREKEFERAFFREFWPENV* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2536 123 SMART G-patch_5 11 57 IPR000467 GO:0003676
Gso10g2536 123 PANTHER G PATCH DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN 1 4 123 - -
Gso10g2536 123 MobiDBLite consensus disorder prediction 70 85 - -
Gso10g2536 123 ProSiteProfiles G-patch domain profile. 13 59 IPR000467 GO:0003676
Gso10g2536 123 Pfam G-patch domain 14 56 IPR000467 GO:0003676
Gso10g2536 123 MobiDBLite consensus disorder prediction 28 100 - -
Gso10g2536 123 MobiDBLite consensus disorder prediction 41 69 - -
Gso10g2536 123 PANTHER BAT4 PROTEIN-RELATED 4 123 IPR039146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2536 Gso-Chr10 52346814 52349275 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2536 3 55 C2H2 Transcription Factor Family AT5G26610 49.057 3.81e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2536 - - gmx:100812494 191.045