Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2532 ATGGCTTCATCTCAGTCGAAGAAGAGAGTTGACGCTGTCGATTCTCGCGCTGCTTCCGTTCTCCTTCGCGCCAAAGATGGAAGTGCTTTTGCTCGATGCGACGACTGCAAGAAGAATGTGCCGGTTGCACTCATCGACATGCACAGTTGCAGCCTTGAAGCTAAAATTAAAATGAACCTAGATGCTCAAGTTGTGGAACAGGCTTCTGAAGCTAAGAAGCCAGAGAGGAAGAAGCCCAAATCCAAAGAGCCTATGGCAAAAAGGGCTAAAGTTGAGAAGGGAAAGAAAGTCAAGGATCCTAACATGCCTAAGCGTCCTCCCACAGCCTTCTTTGCCTTCTTGGATGATTTTAGAAAATCTTTCAAGGAAGCTAATCCTGATTCTAAGGATGTTAAAAGGGTTGGTAAAGAGGCTGGTGAGAAGTGGAGGTCTATGACTGATGAAGAGAAGAAGCCTTATTTGGATAAAGTTGCTGAACTTAAGGCAGAGTATGAGAAGGCTATGGAAAGCTATGAAGCTGGTCAAGATGAAGAAGATCAAGCTGGGTCTGACAAGGAAGCTGCTGCAAAAGAAGTTGAAGAAGAGCTAACTGACGAGGAGTAA 603 0.4511 MASSQSKKRVDAVDSRAASVLLRAKDGSAFARCDDCKKNVPVALIDMHSCSLEAKIKMNLDAQVVEQASEAKKPERKKPKSKEPMAKRAKVEKGKKVKDPNMPKRPPTAFFAFLDDFRKSFKEANPDSKDVKRVGKEAGEKWRSMTDEEKKPYLDKVAELKAEYEKAMESYEAGQDEEDQAGSDKEAAAKEVEEELTDEE* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2532 200 MobiDBLite consensus disorder prediction 167 192 - -
Gso10g2532 200 MobiDBLite consensus disorder prediction 167 200 - -
Gso10g2532 200 MobiDBLite consensus disorder prediction 68 102 - -
Gso10g2532 200 SUPERFAMILY HMG-box 94 179 IPR036910 -
Gso10g2532 200 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 103 172 IPR009071 -
Gso10g2532 200 MobiDBLite consensus disorder prediction 123 149 - -
Gso10g2532 200 CDD HMGB-UBF_HMG-box 103 169 - -
Gso10g2532 200 Pfam HMG (high mobility group) box 103 172 IPR009071 -
Gso10g2532 200 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 4 194 - -
Gso10g2532 200 SMART hmgende2 102 173 IPR009071 -
Gso10g2532 200 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 4 194 - -
Gso10g2532 200 Gene3D High mobility group box domain 98 174 IPR036910 -
Gso10g2532 200 Coils Coil 154 177 - -
Gso10g2532 200 MobiDBLite consensus disorder prediction 66 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2532 Gso-Chr10 52309053 52310722 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Gso10g2532 HMG_box 1.2e-20 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2532 K25507 - gmx:100810345 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0798 20 37388979 37390720 Gso10g2532 10 52309053 52310722 GST