Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2503 ATGGCGCGCGGAAGGAAGAAGCGGCAAAAGAACACAGCTATTATTCCTGTGGATGCAAACCCCACTCAGCAAATAACCCAATCCTTGGATATTGATGCTGAGTGTGAGAGTGAGACCAAAAGGATGAAATTTGCTGAGAACAACGGTGGTGGGGCAGGGGGTTCTTCTTCTGTTGTGAAAAAGAAGCGTGGCAGAAAAAGTAAAAAGGAGAAGGAAAACATGGAAAAGATGTTAGAGAGCAATTTCTTGGAGAAGAGAGATGCTCAAAATGACAACCATGGTGAAAATGCTGAAGTGGGAGGTTCTTCTTCTGTTTCAGAAGGTGTGAAAAAGAAGCGTGGAAGAAAGAGTAAAAAGGAGAAGGAGGACATGGACAAGATGTTAGAGAGCAAATTCTTGGAGAAGAGAGATGCTCAAAACGAAAACCATGGTGAAAATGGTGTAGTGGGAGTTTCTTCTTCTGTTTCAGAAGGTGTGAAAAAGAAGCGTGGAAGAAAGAGTAAAAAGGAGAAGGAGGACATGGAAAAGATGTCAGAGAGCAATTTCTTGGAGAAGAGAGATGCTCAAAACGAAAACCTTGGTGAAAATGGTGAAGTGGGAGGTTCTTTTTCTGTTTCAGAAGGTGTGAAAAAGAAGCGTGGAAGAAAGAGTAAAAAGGAGAAGGAGGACATGGAAAGGAAGATGTTAGAGGAGAAAGATGCTCAAAACGAAAACCATGGTGAAAATGGTGAAGTGGGAGGTTCTTCTTCTGTTTCAGAAGGCGTGAAAAAAAAGCGTGGAAGAAAGAGTAAAAAGGAGAAGGAGGACATGGAAAGGAAGATGTTAGAGGAGAAAGATGCTCAAAACGAAAACCATGGTAAACATGTTGAAGTGGGAGGTTCTTCTTCTCTTTCTGAAGGTGTGAAAAATAAGCGTGGAAGAAAGAGTAAAAAGGAGAAACAGGACATGGAAAATAAGATGATAGAGGAGAAGGATGCTCAATACCAAAACCTTGGTGAAAGTGGCGGCGTAGGAGGTTCTTCTTCCGTTCAAGAAGTTGCGGCAAAGAAGCATGGCAGAAAAAGTAAGAAGGAGAAGGAGGACATGAAAAGGAAGGAGATGCTAGAGGACAATTTGTTGGAGGAGAAAGATGTTCAAGACAAAAACCATGGTGAAAATGGTGGGGTACCTGATACGAGGCATGGAAGAAAAAGAAAGACGCTTAAGGAAGATGATGGTGAGTTGCCTGCGGATTCTCCAGGAAGTGGCATTCAGAAACACTATAGTCTCAGGGCCCCTAAAGTCAATACAGAAGCCGTGATGCCAAACATCAGCAAGAAAGATCCTAAGTGCCTTAAAGAGGAGTCCTTAATGTGTCATCAATGCCAGAGAAATGATAAAGGCAGGGTTGTGAGATGCACAAGTTGTAAGAGGAAAAGATTTTGTGTACACTGTATAGAAAATTGGTATCCTCATTTGAAAGAGGATTATATTGCTGAGGCATGTCCTGTGTGCCGTGGTAATTGCAACTGCAAAGCATGCTTGAGATCCAATGAACTTATTAAAAAAATGAAGAAAAAAGCAAAAACCAATGAAGACGAGAAGGTTGAACTCTCTATGCATTTGCTGCAAGTACTTCTTCCCTATTTAAGGCTGCTGGATGAAGAACAGATGATTGAGTATAAGACAGAAGCAAAGATACAGGGGCTCTCAGTCTCAGAGCTAAATATAGTACAGGCAAATTTTGATGAAGATGAGCGTGTGTACTGTGACAACTGTAAAACGTCAATATTTGATTACCACAGAAGCTGTACAAAATGCTCTTTCGACCTTTGTCTCATCTGTTGTCGTGAACTTCGTAGTGGGGAGCTTGTAGGTGGTGCAGATCCAATTTTGGTAGAGTTTGTCTGTCAGGGTCGTCATTACCTGCATGATGAAAAAGAAAGTAAAAGTGTAAAACGAAATGAACCAAATGCTGTTGCTCCTGTAGTTCGTGAATGGTCAAGATCTGGGTGGCATGCAGAAAGTAATGGTAGCATTCCTTGTCCAAAAGTCAATGATGAATGTAACCATGGTTTTCTTGAACTGAGAAGCATATTAGGTCAACATTTTATCACCAATTTAGTGCATAAAGCAAACAAACTGGCACAAGCATACAAGCTTCAAGATGTAGTTAAGATACCTGACAACTTCTGTTCGTGTTTGAGGCTTGATAGAAACACAGATGCTAGATATAATAATATGAGGAAGGCTGCTTCTCGGGCAGATTCCGGTGACAACTATTTATACTGTCCAAGGGTTGTAGATCTACAGGATGAGGATTTAAGGCACTTTCAGTGGCATTGGGAAAAGGGGGAGCCTGTCATTGTCAGCAATGTGCTTGCAAAAACATCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGTGCATTCCGTCAGATGACTAAGACCAAGCATGAACAACATTTGGATGTGAAGGCAATTGATTGCTTAGATTGGTGTGAGGGAGAAATTAATATCCACCAATTCTTTACTGGGTATACAGAAGGTCGTGAGGATTGGCTTCGCTGGCCTCAAATATTGAAATTAAAAGATTGGCCTCCTTCTAATTTATTTGAGGAACGTTTGCCTCGACATTGTGCAGAGTTCATATCTTCCTTGCCCTTCAAGGAGTATACTGATCCTCTCAAAGGTTCTCTTAACTTAGCTGTGAAGTTGCCTATGGGTTGTCTAAAACCAGACATGGGACCAAAGACATATATTGCTTATGGATTTCATCAGGAGCTCGGGCGTGGTGATTCAGTGACTAAGCTCCATTGTGATATGTCCGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTGAAATTGAAACCAGACCATCTTATTGTCATTGAGGAGTTGAAACAAAAGCACTTTGAACAAGACAAAAGGGAACTACTTGGTGATGATCAGAATAGAGAAACTAGTGTTGACATGCTTAATAATACATCTTCTACTAATGCTTTGGATAAGCAAAACAGTGTCCAAATCATGGAACACAAAGGTGGATTATGTGATGGAAAAGAAGTGTATCAGTTCCATCAACCCTCTGGTGGTAATGCGGTTGCCATTGCTAATGAGGATGGTCTTTCATGCGGATCAAAGCTTAAAGAGGTTGACAAAGTAAAACTAAAGCAAGAAAGTGATATGTTGTCTGCGGGGGATGGTTCAGAAGGTGCTCTCTGGGATATTTTTCGGAGGCAGGATGTACCTAAATTGCAGGAATATCTGAGGAAGCATTTCAGAGAGTTCAGGCATATTCATTGCTGTCCTTTAAAGCAGGTTATTCACCCCATCCATGACCAGACCTTCTATCTGACTGTGGAGCATAAGAGGAAGCTTAAGGAGGAGTATGGAATTGAGCCCTGGACTTTTATTCAGAAGGTAGGGGATGCTGTTTTTGTTCCAGCTGGTTGTCCTCACCAAGTCAGAAATCTGAAGTCATGTATTAAGGTTGCATTGGATTTTGTCTCTCCGGAAAATGTTGGGGAGTGCTTTCGTTTGACAGAGGAATTTCGCACACTTCCAATTAGCCATGCGTCTAGTGAGGACAAATTGGAGGTGAAGAAGATGACAATATATGCTATGCAAGATGTGATCGGAAAATTGGAGGAAGCAAGGTCCGGGAAAACCAAGGTTCCAGAGTAA 3669 0.4162 MARGRKKRQKNTAIIPVDANPTQQITQSLDIDAECESETKRMKFAENNGGGAGGSSSVVKKKRGRKSKKEKENMEKMLESNFLEKRDAQNDNHGENAEVGGSSSVSEGVKKKRGRKSKKEKEDMDKMLESKFLEKRDAQNENHGENGVVGVSSSVSEGVKKKRGRKSKKEKEDMEKMSESNFLEKRDAQNENLGENGEVGGSFSVSEGVKKKRGRKSKKEKEDMERKMLEEKDAQNENHGENGEVGGSSSVSEGVKKKRGRKSKKEKEDMERKMLEEKDAQNENHGKHVEVGGSSSLSEGVKNKRGRKSKKEKQDMENKMIEEKDAQYQNLGESGGVGGSSSVQEVAAKKHGRKSKKEKEDMKRKEMLEDNLLEEKDVQDKNHGENGGVPDTRHGRKRKTLKEDDGELPADSPGSGIQKHYSLRAPKVNTEAVMPNISKKDPKCLKEESLMCHQCQRNDKGRVVRCTSCKRKRFCVHCIENWYPHLKEDYIAEACPVCRGNCNCKACLRSNELIKKMKKKAKTNEDEKVELSMHLLQVLLPYLRLLDEEQMIEYKTEAKIQGLSVSELNIVQANFDEDERVYCDNCKTSIFDYHRSCTKCSFDLCLICCRELRSGELVGGADPILVEFVCQGRHYLHDEKESKSVKRNEPNAVAPVVREWSRSGWHAESNGSIPCPKVNDECNHGFLELRSILGQHFITNLVHKANKLAQAYKLQDVVKIPDNFCSCLRLDRNTDARYNNMRKAASRADSGDNYLYCPRVVDLQDEDLRHFQWHWEKGEPVIVSNVLAKTSGLSWEPLVMWRAFRQMTKTKHEQHLDVKAIDCLDWCEGEINIHQFFTGYTEGREDWLRWPQILKLKDWPPSNLFEERLPRHCAEFISSLPFKEYTDPLKGSLNLAVKLPMGCLKPDMGPKTYIAYGFHQELGRGDSVTKLHCDMSDAVNVLTHIAEVKLKPDHLIVIEELKQKHFEQDKRELLGDDQNRETSVDMLNNTSSTNALDKQNSVQIMEHKGGLCDGKEVYQFHQPSGGNAVAIANEDGLSCGSKLKEVDKVKLKQESDMLSAGDGSEGALWDIFRRQDVPKLQEYLRKHFREFRHIHCCPLKQVIHPIHDQTFYLTVEHKRKLKEEYGIEPWTFIQKVGDAVFVPAGCPHQVRNLKSCIKVALDFVSPENVGECFRLTEEFRTLPISHASSEDKLEVKKMTIYAMQDVIGKLEEARSGKTKVPE* 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2503 1222 Coils Coil 263 283 - -
Gso10g2503 1222 ProSiteProfiles JmjC domain profile. 888 1180 IPR003347 -
Gso10g2503 1222 MobiDBLite consensus disorder prediction 1 422 - -
Gso10g2503 1222 MobiDBLite consensus disorder prediction 301 326 - -
Gso10g2503 1222 MobiDBLite consensus disorder prediction 218 239 - -
Gso10g2503 1222 Pfam JmjC domain, hydroxylase 1067 1163 IPR003347 -
Gso10g2503 1222 MobiDBLite consensus disorder prediction 168 192 - -
Gso10g2503 1222 MobiDBLite consensus disorder prediction 264 286 - -
Gso10g2503 1222 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 221 1207 IPR045109 GO:0032454|GO:0033169
Gso10g2503 1222 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 447 514 IPR018866 -
Gso10g2503 1222 PANTHER - 221 1207 - -
Gso10g2503 1222 MobiDBLite consensus disorder prediction 347 409 - -
Gso10g2503 1222 Gene3D Cupin 757 1189 - -
Gso10g2503 1222 ProSiteProfiles Zinc finger RING-type profile. 452 499 IPR001841 -
Gso10g2503 1222 Coils Coil 217 237 - -
Gso10g2503 1222 SMART cupin_9 869 1180 IPR003347 -
Gso10g2503 1222 MobiDBLite consensus disorder prediction 68 93 - -
Gso10g2503 1222 SUPERFAMILY Clavaminate synthase-like 759 1200 - -
Gso10g2503 1222 MobiDBLite consensus disorder prediction 118 142 - -
Gso10g2503 1222 MobiDBLite consensus disorder prediction 15 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2503 Gso-Chr10 52075340 52082444 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Gso10g2503 JmjC 2.1e-13 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2503 K15601 - gmx:100805723 2258.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0832 20 37693063 37713514 Gso10g2503 10 52075340 52082444 GST