Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2502 ATGGTGATGATGGTGACGGAGGGAAACGACAGCAGCTGCGGCAGCGGCGGCAGCGGAGTGCAGCACCATACGATGTCGTCCTCGTCCTCGCCGGCGCAGAGCCGGCAGCAGCGGCAGAAGGTGGAAGTGTACAATGAGATTCTCCGCCGCTTGAAGGATTCCGGCCACGAAGAAGCTATGCAACCTGGCTTCCACGATCAGCTTTGGGCTCACTTCAATCGCCTCCCTACACGGTATGCGCTGGATGTGAATGTGGAAAGGGCGGCAGATGTTCTCATGCACAAGAGATTGCTGCATTTGGCGCATGATCCTGCTAATAGGCCTTCAATTGAAGTTCGATTAGTTCAGGTTTATCCCATAACCGATGGAAACTCAGCTGACACTTTTGAATCAGATGATCCTGGGATAGAATCTGGACAAAGTTCTTCAAAGTACTCAAGCAGACAGAGTATACATCCACCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCACTGGCTCTTGAAGCAAATAATTCTGAAGAAGACATAGAAGAGGAACAATCTGTACATGCCAATGTTCAATATTCACGGCCCATGCATGAAATCACCATCTCAACAGATGACAAGCCCAAGCTTCTCAGTCAGTTAACTGCTTTGCTTGCTGAGATTGGACTGAACATCCAAGAAGCACATGCATTTTCTACAACTGATGGTTTCTCATTAGATGTGTTTGTTGTTGAAGGATGGCCCTATGAGGAAACAGAAAAGCTTAAAGCAGCTTTGGAAAGTGAAGTCTTGAAGAAGATTGAGAGACAGGTGAGGTCTAGTCCACAATCCGTATCTTCAGTTGACGAGCCTGATCAAGCAAAGTTGTACAGTGAACTGGATCATTTGACAATACCAAATGATGGGACAGATGTTTGGGAAATAGATCCTAAACATTTGAAATATGGAACTCAAATTGCATCTGGGTCATATGGTGAACTATTTAAAGGTGTATATTGTAGCCAGGAAGTGGCCATCAAAGTTCTCAAGGCTGAGCATGTAGATTCAGAATTGCAGAGAGAGTTCGCACAGGAAGTCTATATCATGAGAAAGGTTCGACACAAGAATGTTGTACAATTCATAGGAGCTTGCACCAAGTCCCCACGCTTATGCATAGTAACAGAATTTATGTCTGGTGGAAGTGTGTATGACTACCTACATAAGCAGAAGGGCTTTTTTAAATTTCCTACACTGCTCAAAGTAGCAATTGATGTTTCCAAAGGAATGAACTACTTGCACCAACATAATATAATCCATAGAGACTTGAAGGCTGCCAACCTTTTGATGGATGAAAATTGTACTGTAAAGGTCGCTGATTTTGGGGTTGCTAGAGTTAAAGCTCAATCTGGCGTCATGACTGCAGAAACTGGAACATATCGATGGATGGCTCCTGAGGTTATAGAACACAAGCCGTATGATCACAAGGCTGATGTATTTAGTTTTGGAATTGTTTTATGGGAGTTGCTCACCGGAAAGCTTCCATACGAATATTTAACCCCCCTACAGGCAGCTATAGGAGTGGTTCAAAAGGGTTTGCGACCCACCATCCCGAAGAACACTCATCCAAAGTTTGTGGAGCTTCTTGAGAGGTCTTGGCAGCAAGATCCTACATTGAGACCTGATTTCTCCGAAATTATCGAGATCCTGCAGCAGTTAGCAAAGGAGGTTGGAGATGGAGAGGAGCGGCACAAGGATAAATCTGGAGGACTCCTGTCTGTCCTCAGAAGAGGACATCACTAA 1767 0.4488 MVMMVTEGNDSSCGSGGSGVQHHTMSSSSSPAQSRQQRQKVEVYNEILRRLKDSGHEEAMQPGFHDQLWAHFNRLPTRYALDVNVERAADVLMHKRLLHLAHDPANRPSIEVRLVQVYPITDGNSADTFESDDPGIESGQSSSKYSSRQSIHPPPAFGSSPNLEALALEANNSEEDIEEEQSVHANVQYSRPMHEITISTDDKPKLLSQLTALLAEIGLNIQEAHAFSTTDGFSLDVFVVEGWPYEETEKLKAALESEVLKKIERQVRSSPQSVSSVDEPDQAKLYSELDHLTIPNDGTDVWEIDPKHLKYGTQIASGSYGELFKGVYCSQEVAIKVLKAEHVDSELQREFAQEVYIMRKVRHKNVVQFIGACTKSPRLCIVTEFMSGGSVYDYLHKQKGFFKFPTLLKVAIDVSKGMNYLHQHNIIHRDLKAANLLMDENCTVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPKFVELLERSWQQDPTLRPDFSEIIEILQQLAKEVGDGEERHKDKSGGLLSVLRRGHH* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2502 588 MobiDBLite consensus disorder prediction 134 156 - -
Gso10g2502 588 Gene3D Phosphorylase Kinase; domain 1 299 387 - -
Gso10g2502 588 Gene3D Transferase(Phosphotransferase) domain 1 388 578 - -
Gso10g2502 588 ProSiteProfiles ACT domain profile. 195 272 IPR002912 -
Gso10g2502 588 MobiDBLite consensus disorder prediction 566 581 - -
Gso10g2502 588 SMART serkin_6 309 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2502 588 MobiDBLite consensus disorder prediction 1 40 - -
Gso10g2502 588 SUPERFAMILY ACT-like 193 257 IPR045865 -
Gso10g2502 588 ProSiteProfiles Protein kinase domain profile. 309 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2502 588 CDD STKc_MAP3K-like 315 558 - -
Gso10g2502 588 Coils Coil 163 183 - -
Gso10g2502 588 MobiDBLite consensus disorder prediction 566 588 - -
Gso10g2502 588 Gene3D - 192 266 - -
Gso10g2502 588 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 24 570 - -
Gso10g2502 588 PRINTS Tyrosine kinase catalytic domain signature 383 396 IPR001245 GO:0004672|GO:0006468
Gso10g2502 588 PRINTS Tyrosine kinase catalytic domain signature 420 438 IPR001245 GO:0004672|GO:0006468
Gso10g2502 588 PRINTS Tyrosine kinase catalytic domain signature 466 476 IPR001245 GO:0004672|GO:0006468
Gso10g2502 588 PRINTS Tyrosine kinase catalytic domain signature 485 507 IPR001245 GO:0004672|GO:0006468
Gso10g2502 588 PRINTS Tyrosine kinase catalytic domain signature 529 551 IPR001245 GO:0004672|GO:0006468
Gso10g2502 588 MobiDBLite consensus disorder prediction 8 40 - -
Gso10g2502 588 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 24 570 - -
Gso10g2502 588 Pfam Protein tyrosine and serine/threonine kinase 309 558 IPR001245 GO:0004672|GO:0006468
Gso10g2502 588 SUPERFAMILY Protein kinase-like (PK-like) 293 558 IPR011009 -
Gso10g2502 588 MobiDBLite consensus disorder prediction 124 161 - -
Gso10g2502 588 Coils Coil 245 265 - -
Gso10g2502 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2502 Gso-Chr10 52048345 52057849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2502 3 587 MAP Kinase Kinase Kinase AT4G35780 64.786 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gso10g2502 PK_Tyr_Ser-Thr 1.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2502 - - gmx:100805180 1123.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0834 20 37757458 37773743 Gso10g2502 10 52048345 52057849 GST