Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2501 ATGCAATCTATCAGGAAGTCCTTTAAATCTTATGGTTCCTACAACAAACATTCTAGGTTTTTTGGCGCCGGAAACACCGATCCCGAACACGAGCAACTCCCCATTCTCCACGACCAGGAAACCCTCCGCCAATCCGCCATGCCCGCCGGTGACTACGTCGTCAAAATCAACGAGGACGGAAGCGAGGCCCCTCAGGACAACAAGATTTGGCGCGAGTCCAGCTACGAATTCTGGAATAACGACACCACCACCACCACCATCCCTGGCAGCAGCGAAGAGAGCTTCGATTTCCGCCATTCGGAGGACCCGCCGTCGCAGCTGATCGGACGCTTCCTCCACAAGCAGCGAGCCTCCGGCGAGATGCAGCTCGACATGGATTTGGAGATGGAGGAGCTGCAGCGCGAAGGCGGCGACGACGACGACGACGGAAAGTTAACGCCGGTTGAGGAATCTCCGATGACACACCGCGTCTCGAGAGAGCTCAAGGTTTCCTTCGAGGAACCTGCCTACAATGTGAATTTCCTCGAAACGCAAAACGACGCCGTCAGAAGAAGGCACAGCAAGGACTCGCCGTCTCTCGCGGAGTTCCAACGCCCTCCCCAACCGCCGCAATACGACCGTCGCCGGTCTCCCTCGCCGTCGCCAGCCTGCGGCGACGAGGTTGTTCGGTGCACCTCGAACGCTTCCTTCGAAAGAAACCTTTCCATGCAGAGAAAATCGGCCTTGTTGAAGGCCAAAACGAGGTCTAGGCTAATGGACCCGCCCGAAGAACCCGACAGAAAATCGGGTCGTGTTTTAAAATCGGGTCAACTCCTATCCGGGTTTTTGGGGAAGAAGAATGACGAAGAGGATGATGATCCGTTTTTGGAAGAGGATCTTCCTGATGAGTTTAAGGAGACTCATTTCAGCTTGTGGATTCTTCTCGAGTGGTTGAGTTTGATTTCGATCATTGGGTTGTTGATAACCACCCTTTGTGTTCCCTTTCTGAGGAACAAGAATCTGTGGCAGCTTAGGTTGTGGAAATGGGAGGTTATGGTTTTGGTTTTGATCTGTGGCAGGTTGGTGTCTGATTGGGTTGTTAGGATTGCTGTGTTCTGCATTGAGAGAAACTTCCTTTTGAGGAAGAGGGTATTGTATTTTGTGTATGGTGTGAGGAAGGCTGTTCAGAATTGTGTTTGGTTGGGGCTTGTGTTGATTGCTTGGCATTTGTTGTTTGACAAGAGGGTGCAGAGGGAGACCCACAGTGATTTCCTCGAGTATGTGACTAAGGTGTTGGTGTGTTTCCTTGTGGGGACTTTGGTGTGGTTGTTGAAGACCCTTATGGTGAAGGTGTTGGCTTCCTCTTTTCATGTGAGTACCTACTTTGACAGGATTCAGGAGTCGCTGTTTAATCAGTTTGTGATTGAGACGCTTTCAGGGCCGCCTTTGGTGGAGATTCAGAAGGCCGAGGAGGAGGAGGAGAGGCTTGCTGATGAGGTTCAGAAGCTTCAGAATGCTGGGGTTACCATACCCCCTGATCTTAGGGCATCTGCTTTTTCTAATATTAAGAGTGGCAGGCTGAGGAGTGGAATGCTGCAGAAAAGCCCCAGAGTTAAGAGCGGCAAGTTTTCGCGGCCACTTTCCAAGAAGTCTGATGAGGGGAATGTGATCACTATGGATAATCTGCATAAGCTCAATCCCAATAATATCTCTGCCTGGAATATGAAAAGGTTGATGAACATGGTCCGGCATGGGGCTCTTTCTACCCTGGATGAACAGATTCTTGATAACTCGAATGATGACGACAATGCCACGCAAATTAGAAGTGAATACGAGGCAAAGGCTGCAGCTAAGAAAATATTTCACAATGTTGCTAGGCGCGGCTGCAGGTATATATACCCGGATGACTTGATGCGGTTTATGCGAGAAGATGAAGCTGCAAAAACCATGAATCTCTTTGAAGGAGCTTCTGAAGCTGGGAAAATCAGCAAATCAGCCTTGAAGAACTGGGTGGTTAATGCCTTCAGGGAAAGGAGAGCACTTGCTTTGACATTGAATGATACCAAAACGGCAGTGAACAAACTTCATCGAATGCTCAATTTTATAGTTGGAATTATTATACTGGTTATTTGGCTCTTGATATTGGAACTTGCCACCACCAAATTTCTTCTCTTTGTGAGCTCACAGGTTGTCGTGGTTGCATTTATATTTGGAAACACCTGCAAGACCATATTTGAAGCAATTATTTTCTTATTTGTCATGCACCCATTTGATGTGGGAGATAGATGTGAAATTGATGGGGTTCAGATGGTTGTAGAAGAAATGAACATATTGACAACCATATTTCTGAGATTTGATAATCAAAAGGTCATCATCCCTAACAATGTCCTTGCTACCAAGGCCATATATAACTATTACCGGAGTCCTGACATGGGAGATGCTATCGAATTCTGTGTACATATATCTACCCCAGTTGAAAAGATTTCACTCATTAAACACAGAATACAAAGTTACATTGATAACAAGAAGGAGCACTGGTATCCTTCACCTTTAATTGTATACAGGGATTATGACCAATTAAACATGGTGAGGTTGGCTATCTGGCCAACTCATAGAATGAACTTCCAAGACATGGGAGAAAGGTTTGTGAGGAGATCCCTTTTGCTTGAAGAGATGATCAAGATTTTCAGGGAGCTTGACATTAATTACCGGCTCTTGCCCATGGACATTAATGTGAGAGCCACTCCTACCACTTCTGATCGGCTTCCACCTAGTTGGACATCAGTTCCAACTCCAAGTTGA 2781 0.4707 MQSIRKSFKSYGSYNKHSRFFGAGNTDPEHEQLPILHDQETLRQSAMPAGDYVVKINEDGSEAPQDNKIWRESSYEFWNNDTTTTTIPGSSEESFDFRHSEDPPSQLIGRFLHKQRASGEMQLDMDLEMEELQREGGDDDDDGKLTPVEESPMTHRVSRELKVSFEEPAYNVNFLETQNDAVRRRHSKDSPSLAEFQRPPQPPQYDRRRSPSPSPACGDEVVRCTSNASFERNLSMQRKSALLKAKTRSRLMDPPEEPDRKSGRVLKSGQLLSGFLGKKNDEEDDDPFLEEDLPDEFKETHFSLWILLEWLSLISIIGLLITTLCVPFLRNKNLWQLRLWKWEVMVLVLICGRLVSDWVVRIAVFCIERNFLLRKRVLYFVYGVRKAVQNCVWLGLVLIAWHLLFDKRVQRETHSDFLEYVTKVLVCFLVGTLVWLLKTLMVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIQKAEEEEERLADEVQKLQNAGVTIPPDLRASAFSNIKSGRLRSGMLQKSPRVKSGKFSRPLSKKSDEGNVITMDNLHKLNPNNISAWNMKRLMNMVRHGALSTLDEQILDNSNDDDNATQIRSEYEAKAAAKKIFHNVARRGCRYIYPDDLMRFMREDEAAKTMNLFEGASEAGKISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFIVGIIILVIWLLILELATTKFLLFVSSQVVVVAFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTIFLRFDNQKVIIPNNVLATKAIYNYYRSPDMGDAIEFCVHISTPVEKISLIKHRIQSYIDNKKEHWYPSPLIVYRDYDQLNMVRLAIWPTHRMNFQDMGERFVRRSLLLEEMIKIFRELDINYRLLPMDINVRATPTTSDRLPPSWTSVPTPS* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2501 926 MobiDBLite consensus disorder prediction 81 105 - -
Gso10g2501 926 MobiDBLite consensus disorder prediction 1 30 - -
Gso10g2501 926 SUPERFAMILY Sm-like ribonucleoproteins 739 798 IPR010920 -
Gso10g2501 926 MobiDBLite consensus disorder prediction 138 160 - -
Gso10g2501 926 PIRSF Memb_At2g17000 31 926 IPR016688 -
Gso10g2501 926 Gene3D - 749 798 IPR023408 -
Gso10g2501 926 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 2 913 IPR016688 -
Gso10g2501 926 Pfam Mechanosensitive ion channel 691 895 IPR006685 GO:0016020|GO:0055085
Gso10g2501 926 MobiDBLite consensus disorder prediction 117 160 - -
Gso10g2501 926 MobiDBLite consensus disorder prediction 180 220 - -
Gso10g2501 926 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2 913 - -
Gso10g2501 926 Coils Coil 476 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2501 Gso-Chr10 52040332 52044618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2501 51 926 Mechanosensitive Ion Channel Family AT1G78610 58.370 0.0 957
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2501 K22048 - gmx:102665658 1733.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0835 20 37783432 37793591 Gso10g2501 10 52040332 52044618 GST