Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2451 ATGGGAAAGAAATCTTTGAAGTTGCCCTCTCTTTTCAAAACCAAAGAACCCCCAAGAAATCAACATCATCATCATCATCATAATCATAATCCTAATCATCCATGGCAATTCATGCCCTCTTGTGGCCACTCAAAGACCCTCTCTTTCCGAGGTGGAGATGATGACATGTTCAAGACAGTTAACTCTGTGTTCTTCGACCCTTCAGCTGAGAGCACTATTGAAACTCCAAAGTCATGGTTCACAACCTCATCTGAATCTGCAAGCATCTCAACTGAGTCAGAAGACTACCACTACTGTGATGGGGAGTCTTTGGAGATGTTGGTACGTGGTGTGAGGTCAGAGAGGCTTTTTTTCGAACCTGGTGACACAAGTTCCATCTTGGAAAAGGCCAAGGCTAGTGGTTTTCCCTTCAAAGAAAGTGTGGTCCTAGCTATGGAGTCAGAGGACCCTTATGAGGATTTCAAGAGATCAATGGAGGAGATGGTTGAGTCTCATGGAGTTAGAGATTGGGAAGGCTTGGAGGAGCTTTTAACTTGGTACTTAAGGGTCAATGGTAGAAATAATCATGGGTTTATAGTGGGTGCTTTTGTTGATTTACTCTTTAGTTTAGCAGCTTCTAATGGTTCTATCACTTGTTCTGATTCAACTTCATATTCTTCTGCTGTTTCTTCTTTTGCTTCTTCCCCCTTGAGTGGCCAGAATGAGATTGTTGAGCATGGGATTGGGAACGAAAATGATGGTGCTGTAACATCTTAG 756 0.4272 MGKKSLKLPSLFKTKEPPRNQHHHHHHNHNPNHPWQFMPSCGHSKTLSFRGGDDDMFKTVNSVFFDPSAESTIETPKSWFTTSSESASISTESEDYHYCDGESLEMLVRGVRSERLFFEPGDTSSILEKAKASGFPFKESVVLAMESEDPYEDFKRSMEEMVESHGVRDWEGLEELLTWYLRVNGRNNHGFIVGAFVDLLFSLAASNGSITCSDSTSYSSAVSSFASSPLSGQNEIVEHGIGNENDGAVTS* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2451 251 PANTHER TRANSCRIPTION REPRESSOR OFP13 6 230 - -
Gso10g2451 251 MobiDBLite consensus disorder prediction 1 35 - -
Gso10g2451 251 Pfam Transcriptional repressor, ovate 147 203 IPR006458 -
Gso10g2451 251 ProSiteProfiles OVATE domain profile. 143 202 IPR006458 -
Gso10g2451 251 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 141 204 IPR006458 -
Gso10g2451 251 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 6 230 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2451 Gso-Chr10 51532932 51533954 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso10g2451 Ovate 5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2451 - - gmx:102668773 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0892 20 38439738 38440727 Gso10g2451 10 51532932 51533954 GST