Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2448 ATGTGCTTCTTAGATCTCGTGATACGTCTTGTCGTTTATCCTCTCTCTCTCTTATACTTGCTCACACATCTTCAAACTCCGTTGCTGCTGACAAACATGGCCGCTGCCATCGGAAGCATGTTGGACACGAATGGGCTCATGGTCCAAGTCATCACCGGACGGTGGTTCGTGGTGTTCGCCTCCTTTCTAATCATGGCCGCCGCCGGCGCCACCTACATGTTCAGCCTCTACTCCGGCGACATAAAATCCGCCCTCGCCTACGACCAAACCACCTTAAACCTCCTTAGTTTCTTCAAAGACTTGGGCGGCAATGTCGGCGTCCTCTCCGGCCTCATCAACGAGATCACTCCCCCTTGGGTGGTCCTCGCCATCGGTTCCATCCTCAACTTCTTCGGCTACTTCATGATATGGCTCGCGGTCACCAAAAAAATACCCAAACCGCACGTGTGGCACATGTGCCTCTACATCTGCTTAGGCGCCAACTCTCAGTCCTTCGCCAACACCGGTTCCCTTGTCACGTGCGTCAAGAACTTCCCAGAAAGCCGTGGGGTTGTTCTTGGCATTCTCAAAGGCTACGTGGGTCTCAGTGGAGCCATCATAACACAACTCTACTTCGCTTTTTACTACGATGATTCAAGGTCCTTGATTTTGCTTATAGGGTGGCTCCCAGCTGCTATTTCCTTCCTTTTCCTACGAACCATTCGCTACATGAAACCCCTTCGACAACAACCCAATGAGCTAAGTGTTTTCTACAAGTTTTTGTATATCTCACTTGGCCTTGCTGGGTTTCTTTTGGTCATGATCATAGTTCAGAAGCAAGTGCATTTCTCACAGAGTGAGTATGGAGTCAGTGCTGGGGTTGTTCTTTTTTTACTATTCCTCCCTCTTGCTGTTGTGTTTGTTGAACAATATAAAATCAGAGAGAGTCAAAAGCTAGCATTCATTAACCCCTCCGCAGTCAAGATAGTAGCTACTGAAGGAGAGTCTAACACTCCAATTTCAAGAAAGATTGATGAAGAAATAATAACTAGTACTAGATGGTGGCAAAAAGTGTTTAGTCCACCGCCTAGAGGTGAGGACTATACTATACTTCAAGCACTATTCAGCTTAGACATGATACTGCTATTCTTCGCTGGCACATGTGGTGTTGGTGGAACCTTGACCGCAATTGATAACCTTGGTCAGATTGGAACATCGCTAGGGTACCCAAAGGCTAGCATAAGCACGTTTGTGTCGTTAGTGAGCATTTGGAATTATATGGGAAGGGTTTTTTCTGGGTTTGTTTCAGAACACTTTCTAAAAAAGTACAAGTTCCCTCGACCACTCATGCTCACGCTAACCCTCCTCTTATCCTGTGTCGGTCACCTTTTGATAGCCTTCGATGTGGCCAACGGACTCTACGTGGCCTCGGTGATCATTGGCTTCTGCTTTGGCGCGCAATGGCCCCTGGTCTTCGCCATAATCTCGGAGCTCTTTGGACTCAAGTACTATTCAACGTTGTACAACTTTGGCGGTGCAGCGAGCCCAATTGGGCTTTATGTGCTTAACGTCAGGGTAACGGGGTACTTGTATGACAAAGAAGCTCTGAAGCAATTGGCAGCCACGGGGATCTCTAGAAAGATTGACACCGAATTGACTTGTGTTGGGTCCAGTTGCTTCAAATTGTCCTTCATTATTATCACTGCAGCCACCTTTTTTGGCGCCTTAATTTCACTGATTTTGGTGGCTAGGACAATTAAGTTCTACAAAGGGGATATATACAAGAGGTACCGGGAGCAAGCCGAGGAAGAAGCCACCGCTGTCACTGAGATGGCTGTGGTCCAAAATCGCGCCGAGAAATTAGAAGAAACCAAAGTTATTGGAGCGTAA 1869 0.4735 MCFLDLVIRLVVYPLSLLYLLTHLQTPLLLTNMAAAIGSMLDTNGLMVQVITGRWFVVFASFLIMAAAGATYMFSLYSGDIKSALAYDQTTLNLLSFFKDLGGNVGVLSGLINEITPPWVVLAIGSILNFFGYFMIWLAVTKKIPKPHVWHMCLYICLGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYFAFYYDDSRSLILLIGWLPAAISFLFLRTIRYMKPLRQQPNELSVFYKFLYISLGLAGFLLVMIIVQKQVHFSQSEYGVSAGVVLFLLFLPLAVVFVEQYKIRESQKLAFINPSAVKIVATEGESNTPISRKIDEEIITSTRWWQKVFSPPPRGEDYTILQALFSLDMILLFFAGTCGVGGTLTAIDNLGQIGTSLGYPKASISTFVSLVSIWNYMGRVFSGFVSEHFLKKYKFPRPLMLTLTLLLSCVGHLLIAFDVANGLYVASVIIGFCFGAQWPLVFAIISELFGLKYYSTLYNFGGAASPIGLYVLNVRVTGYLYDKEALKQLAATGISRKIDTELTCVGSSCFKLSFIIITAATFFGALISLILVARTIKFYKGDIYKRYREQAEEEATAVTEMAVVQNRAEKLEETKVIGA* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2448 622 PANTHER MFS TRANSPORTER 39 618 - -
Gso10g2448 622 Gene3D MFS general substrate transporter like domains 368 582 IPR036259 -
Gso10g2448 622 CDD MFS_Mch1p_like 53 568 - -
Gso10g2448 622 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 39 618 - -
Gso10g2448 622 Pfam Nodulin-like 54 300 IPR010658 -
Gso10g2448 622 SUPERFAMILY MFS general substrate transporter 54 296 IPR036259 -
Gso10g2448 622 SUPERFAMILY MFS general substrate transporter 336 580 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2448 Gso-Chr10 51494799 51496850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2448 34 593 Nodulin-like Gene Family AT2G39210 68.486 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2448 - - gmx:100787176 1160.98