Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2447 ATGGTAGTTGGAGGTTCGAATACCGGTGTTCATGGATGGCGAGACATCAAGAGTCTCACCGTCCAAGTCATCACCGGGAGATGGTTCGTGGTGTTCGCCTCCTTTCTAATCATGGCAGCCGCTGGAGCCACCTACATGTTCGGTCTCTATTCCAGCGACATCAAAACAACCCTCGGTTACGACCAAACCACTCTCAATCTCCTCAGTTTCTTCAAGGACTTGGGCACCAACGTTGGGGTCATCTCAGGCCTAATCAACGAGGTCGCTCCACCTTGGGTTGTCCTCGCCATTGGTGCCATCCTCAACTTCTTTGGCTACTTCATGATTTGGCTTTCCGTCACCCAAAAAATAGCCAAACCCAAAGTGTGGCAGATGTGTCTCTACATCTGCATAGGCGCTAACTCTCAGACCTTCGCCAACACTGGTTCCCTTGTCACTTGTATCAAGAACTTTCCAGAAAGAAACGGGGTCGTGTTAGGTATCCTCAAAGGTTACCTCGGTCTTAGTGGTGCAATCATCACACAACTCTACTCTGCCATATACTATGATGACACAAGGGCTTTGATTTTGCTCATAGCTTGGCTCCCCGCTGCTATTTCCTTCGCTTCCCTTCGAACCATTCGTTACATGAAGCCTGTTAGGCAGCCTAATGAGCTCAATGTTTTCTACAAGTTTCTGTATATTTCTCTTGGCCTTGCTGGGTTTCTTTTGGTCATGATCACTGTACAGAAAAGGGTCAACTTCACTCAGAGTGAGTTTGGTGTCAGCTCTGCTATGGTGCTCTTTCTGCTCCTCCTCCCACTTGCTGTTGTTTCTATGGAGGAATATAAGGTCTGGCAGAGTAAAAGGCTCGCTTTGGTTGACCCCTCCCCGGTGAAAATAGTAACCGATCAGGGTGAAAAGGTGAAACCGAATGAGACTACTAATGTTAGCAGCAATTCAGTTTCTTCCAATGATACCAGGTGGTGGGAAAATGTTTTTAGTCCACCAGCAAGAGGTGAGGACTATACAATACTTCAGGCGCTATTCAGCATCGACATGTGGATACTATTCATATGTAGCATATTTGGTATTGGTGGCACGTTGACCGCAATAGATAACCTTGGTCAGATAGGAAAGTCGCTTAGATACCCAAAGAAAAGCATAAGCACTTTCGTGTCCCTAGTAAGCATTTGGAATTATCTAGGAAGGGTTTTCGCTGGATTTGTTTCTGAACATTATCTGCAAAAGTACAAGTTCCCTCGTCCTCTCATGCTTACACTAACCATGCTCTTGTCATGTGCTGGTCACCTTCTGATTGCATTTGACGTGCCAAATGGTCTTTATGCGGCTTCGGTGATTATTGGGTTTTGTTTTGGCGCACAGTGGCCTTTACTTTTTGCCATTATATCCGAGCTTTTTGGACATAAATATTATGCAACTTTGTATAACTTTGGAAGTGCAGCAAGTCCACTAGGGCTATATGTGCTTAATGTGGTGATGACTGGGCATTTGTATGACAAAGAAGCCAAGAAGCAACTTGCGGAATTGGGGCTTGAGAGAAAGGAAGGACAGGAATTGAACTGCATTGGGATCCATTGCTTCAAGTTATCCTTCATTATTATCACAGCTGCTACTTTCTTTGGTGTTATTGTTTCACTCATCTTGGTAGCTAGGACAAGAACCTTTTACAAAAGTGACATATACAAGAGATACCGGGATGCTGCAGCCACGGTGACAGAAGCTGAAATGGCGAAGGTGGAGAACGGAAACAACGCAAAGAAAGATGAGAAACATGTGGTGCCAACTCAGGAGTAA 1797 0.4524 MVVGGSNTGVHGWRDIKSLTVQVITGRWFVVFASFLIMAAAGATYMFGLYSSDIKTTLGYDQTTLNLLSFFKDLGTNVGVISGLINEVAPPWVVLAIGAILNFFGYFMIWLSVTQKIAKPKVWQMCLYICIGANSQTFANTGSLVTCIKNFPERNGVVLGILKGYLGLSGAIITQLYSAIYYDDTRALILLIAWLPAAISFASLRTIRYMKPVRQPNELNVFYKFLYISLGLAGFLLVMITVQKRVNFTQSEFGVSSAMVLFLLLLPLAVVSMEEYKVWQSKRLALVDPSPVKIVTDQGEKVKPNETTNVSSNSVSSNDTRWWENVFSPPARGEDYTILQALFSIDMWILFICSIFGIGGTLTAIDNLGQIGKSLRYPKKSISTFVSLVSIWNYLGRVFAGFVSEHYLQKYKFPRPLMLTLTMLLSCAGHLLIAFDVPNGLYAASVIIGFCFGAQWPLLFAIISELFGHKYYATLYNFGSAASPLGLYVLNVVMTGHLYDKEAKKQLAELGLERKEGQELNCIGIHCFKLSFIIITAATFFGVIVSLILVARTRTFYKSDIYKRYRDAAATVTEAEMAKVENGNNAKKDEKHVVPTQE* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2447 598 Gene3D MFS general substrate transporter like domains 338 558 IPR036259 -
Gso10g2447 598 Pfam Major Facilitator Superfamily 348 551 IPR011701 GO:0022857|GO:0055085
Gso10g2447 598 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 598 - -
Gso10g2447 598 CDD MFS_Mch1p_like 26 543 - -
Gso10g2447 598 Pfam Nodulin-like 27 271 IPR010658 -
Gso10g2447 598 PANTHER MFS TRANSPORTER 10 598 - -
Gso10g2447 598 SUPERFAMILY MFS general substrate transporter 27 554 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2447 Gso-Chr10 51485296 51487560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2447 15 592 Nodulin-like Gene Family AT2G39210 66.838 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2447 - - gmx:732549 1148.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0895 20 38481521 38483665 Gso10g2447 10 51485296 51487560 GST