Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2441 ATGCAAAGCTTCAACACAACCGAATCAGAATCGACCTCACCTCTATATTCCCATTCTCCCTTCTATCACCGGGGAAATGACCCCAGCCGAAATCCAACGCGTTTCTCGGATCTTCAGCATTCTTTTCGGCAACACGATGCCGTTGATTTAAGCTCAAGTTCTGTGTTTGGTGCAAAGTCGAGCAATGTGGCTGTTGTTGCAAGCAACTTGCAGTGTGGGACATTCAACACGAACCTTGGGTGTGCAGAATTTGGTTCGATAGAGCAGCGAGGCATGTTTCAGAGAGGAACCAATAGCGCCACCACCGTGTCCATGGGGAACCGGCACGTTGAGAACTGGGCAGAAGATAGCCAACACACTGAAGATACTTGCACAGATATAGACACCGATGATAAAAACCAATGTTTCTCAACTGTGTCTTGGTGCAATGGAGTTGGGGACGGGGCACTTGTAGTTGTAGACTCACAGGATCAAAGTAAGACTAAGGTTAAAGCTGAAGACCAGAAGACCGTACGTAGGCTAGCTCAGAATCGTGAGGCTGCGAGGAAGAGTCGGTTGAGGAAAAAGGCATATGTGCAACAGTTGGAGACCAGTCGAGTTAGACTTGCGCAATTAGAGCAAGAACTTCAACGGGCACGTCAGCAGGGTGCATTTATTGCAACTGGAAACCAGGGGGATCGCAGTCATTCTGCTGTTGGAAATGGTGCCCTAGCATTTGACATGGACTATGCCCGTTGGTTTGATGAGCATCAACGGCTGATCAATGATATAAGATCAGCTATAAATTCTCAAATGGATGAGAATGAACTGCACCTTCTTGTAGATGGAGTGATGGCACATTATGATGAATTATTTAGGTTGAAGAGCATAGGGGCAAAGGCTGATGTATTTCACATACTTTCTGGGATGTGGAAGACACCTGCAGAAAGATGCTTCATATGGCTCGGTGGTTTTCGATCTTCGGAACTTCTCAAGATAGTTAGAAACCAGCTTGAGCCGTTAACCGAACAGCAGTTGATGGGCATTTACAATCTGCAGCAGTCTTCCCAGCAGGCTGAGGATGCATTATCACAAGGCATGGATGCATTGCAGCAGTCTCTTTCAGAGACACTTTCTTCCTCCTCTTTAGGGCCCTCTGGTTCTGGAAATGTTGCTGAGTACATGGGCCAAATGGCAATTGCACTGGGCAAGCTGGCCACACTAGAGAATTTCCTTCATCAGGCTGACCTATTGAGGCAACAAACTCTGCAACAGATGCGTCGAATTTTGACCACTTTCCAAGCTGCTCGTGCGCTACTTGTGATAAATGATTACGTTTCACGGCTTAGAGCTCTTAATTCATTATGGTTAGCGTGTCCTAGAGAGTACTAG 1371 0.4675 MQSFNTTESESTSPLYSHSPFYHRGNDPSRNPTRFSDLQHSFRQHDAVDLSSSSVFGAKSSNVAVVASNLQCGTFNTNLGCAEFGSIEQRGMFQRGTNSATTVSMGNRHVENWAEDSQHTEDTCTDIDTDDKNQCFSTVSWCNGVGDGALVVVDSQDQSKTKVKAEDQKTVRRLAQNREAARKSRLRKKAYVQQLETSRVRLAQLEQELQRARQQGAFIATGNQGDRSHSAVGNGALAFDMDYARWFDEHQRLINDIRSAINSQMDENELHLLVDGVMAHYDELFRLKSIGAKADVFHILSGMWKTPAERCFIWLGGFRSSELLKIVRNQLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLSETLSSSSLGPSGSGNVAEYMGQMAIALGKLATLENFLHQADLLRQQTLQQMRRILTTFQAARALLVINDYVSRLRALNSLWLACPREY* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2441 456 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 172 187 IPR004827 GO:0003700|GO:0006355
Gso10g2441 456 ProSiteProfiles DOG1 domain profile. 236 452 IPR025422 GO:0006351|GO:0043565
Gso10g2441 456 PANTHER TRANSCRIPTION FACTOR TGA9 42 455 - -
Gso10g2441 456 SMART brlzneu 165 228 IPR004827 GO:0003700|GO:0006355
Gso10g2441 456 Gene3D - 168 218 - -
Gso10g2441 456 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 167 211 IPR004827 GO:0003700|GO:0006355
Gso10g2441 456 CDD bZIP_HBP1b-like 169 221 - -
Gso10g2441 456 Pfam Seed dormancy control 254 328 IPR025422 GO:0006351|GO:0043565
Gso10g2441 456 PANTHER TRANSCRIPTION FACTOR PERIANTHIA 42 455 - -
Gso10g2441 456 MobiDBLite consensus disorder prediction 1 36 - -
Gso10g2441 456 SUPERFAMILY Leucine zipper domain 169 212 IPR046347 GO:0003700|GO:0006355
Gso10g2441 456 Coils Coil 188 215 - -
Gso10g2441 456 Pfam bZIP transcription factor 168 208 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2441 Gso-Chr10 51436277 51440334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2441 12 455 bZIP Transcription Factor Family AT1G68640 54.741 2.32e-156 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso10g2441 DOG1 2.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2441 K14431 - gmx:100775783 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0901 20 38548158 38552494 Gso10g2441 10 51436277 51440334 GST