Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2439 ATGACAAGAAAAATAATGGCTACTCTCACCTCAAATCTAAACCTTAGGCCACAACAATACACTGTTCCCAAAGACTATCCACCACATGGTTCTGTAGTTGAGGAAATACAAGGCCTTATTAGAGTACACAAAGATGGATACGTGGAACGACCGCAAGTTGTTCCATGTGTCACTGCTAGTACAATGAGTCCAGAACTAAATGTGACATCTCGTGACATGGTCATCGACAGTGTCACAAACATATGGGCACGTTTTTATGTTCCAATTTCCCAACACAAAAAAATGCCTTTGCTCGTTTTTTTTCACGGTGGAGGATTCTGTGTTGGATCAGCAGCATGGAGTTGCTACCATGATTTCCTTGCAAGGCTATCTACCAAAGTTGGGTGTGTGATTATGTCAGTGAACTATCGATTGGCCCCAGAGAACCCTCTTCCAGCACCCTATGATGATGGATTAAAGGCCATCATGTGGCTACATCAACAACACAACAACAAGGGTAGTGGTACTGAATGGTGGACTTCAAAGTGCAACTTCTCTAGTGTTTTCTTAGGTGGGGACAGTGCTGGTGCTAACATAGCCTACAACGTTGCCACTAGGCTATGTGCATGTGATGGTGCGGCTTTAACTTTAAGACCCATGAATTTGAAGGGTCTTATTTTGATACAACCTTTTTTTGGTGGGGAAGTGAGAACAGATTCCGAGAAAGGCATGGCTCAATCACCTGGTTCTGCTTTGAACTTGGCAGCTTCTGATAGTTATTGGCGCTTGGCGTTACCGTGTGGTGCGAAACGTGACCATCCATGGTGCAACCCTTTGGTGAAGTTGGAGGAGTTGAAGCTCATGCGTACCTTGGTGTGCATCTCGGAGATGGACATATTGAAGGATAGGAACTTGGAGTTTTGTGATGCTTTGGTCAGAGCAGGGAAAAGGGTTGAGTATGGGGTGTTTAGAGGTGTTGGACATGCGTTTCAGATTCTGAGCAAGTCTCAGGTAGCAAAGAGTAGAACCAAGGAAATGATGGCTCGTGTTAAGTCCTTCATGGCTCTCTGA 1050 0.4486 MTRKIMATLTSNLNLRPQQYTVPKDYPPHGSVVEEIQGLIRVHKDGYVERPQVVPCVTASTMSPELNVTSRDMVIDSVTNIWARFYVPISQHKKMPLLVFFHGGGFCVGSAAWSCYHDFLARLSTKVGCVIMSVNYRLAPENPLPAPYDDGLKAIMWLHQQHNNKGSGTEWWTSKCNFSSVFLGGDSAGANIAYNVATRLCACDGAALTLRPMNLKGLILIQPFFGGEVRTDSEKGMAQSPGSALNLAASDSYWRLALPCGAKRDHPWCNPLVKLEELKLMRTLVCISEMDILKDRNLEFCDALVRAGKRVEYGVFRGVGHAFQILSKSQVAKSRTKEMMARVKSFMAL* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2439 349 PANTHER CARBOXYLESTERASE 6-RELATED 12 347 - -
Gso10g2439 349 Pfam alpha/beta hydrolase fold 98 324 IPR013094 GO:0016787
Gso10g2439 349 SUPERFAMILY alpha/beta-Hydrolases 26 347 IPR029058 -
Gso10g2439 349 PANTHER ARYLACETAMIDE DEACETYLASE 12 347 - -
Gso10g2439 349 Gene3D alpha/beta hydrolase 37 348 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2439 Gso-Chr10 51426592 51427880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2439 29 347 Carbohydrate Esterase AT5G16080 56.656 1.14e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2439 - - gmx:100775824 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0903 20 38560626 38561988 Gso10g2439 10 51426592 51427880 GST