Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2436 ATGGCCACCGATGCCCGTGACTCGCGTCGCAAGCATCACCGATCTTCCTCTCCAGAGGACGTGGACAGATCCTCGAAGCGTCACAAGCACCGCCATAACAGCCATCGCCACCGCCACGGGAGCAAAAAGCGCGACGAAGAGGTTGAATTCGATGATCGAACAATTGCTGCGGTTCCTTCTCCAACTCCGCACAGATATCTCCCTGACGACGATGTGGAGGAGGGAGAGATCCTTGAAGATGAGGCTCTCGACGGTGAGGTTGAAAAAAAGGAGACGGAATCTGATGTTGAACCCGGTGAAATCAAGGTGACAGGAGATCGAGATGTTCGATCTGATAATCAAAATTCGGAACCCCTCACTAAAATTTCAGAAACTAGAAATGAAGACATTAGGGATGATAAATTTATTAGTCCTGCAATTGATGCACAAGATGATGTCTCTCCTAATCGTTCAAGTTCTGAGACTCGAGATGGAAAGCATGCTCAAGCTCGTACAGATGGTGTGGGCAATGGTTATTTGGATCCTAAATCTTCCAAAGGGGATAAGTGGCAGAATGGGGAACTTGGACATTTTAAAGGTAATGAGAAACTAAAAGGTGACTTTCATGACCCAACACTGGAGGCTAACGTGAGGAAAGCACATTACCATAGGAATTCATCCTCCGAAAGTGGAGGAGAAAAGTATAGAATGTCAGGAAGTTCTCCTTCTCATGGTAGATATAGAAGTCGATCAAGATCAATTGGTCATACTAGAGACAGGTCTCGCTCTCGTAGTATCATAGACGAATATCCTCATTCTAAGAGAAGGCGCTTTGACTATGACCATGATGAGGAAAGAGTGAGGGCACGTGGAAGGGAGCATGGTCATGGCAGTGTGATAGATGATAGAAGGGAATACGGTATCAGATATCACAATCGAGAGGCCAGGGATAGAGATGTGGATAGAGACTTGCACGGAGAAAAGAAGCAAGAGGAAACTAGCAGGGGTAAAGAGATTGAGTGGGAACACAAAAGGGGAAAGGAACGTGAAAGGAGCCGTGATAGGTATAGAAGGGATATAGAAAAAGATAGGAGCAGGGAGAGGGAGGAGGATAGGGACAGGAGACAAGAAAAGGAAAGAGATAGGAGCTGGGATACAGTGATGGAGAGGGATAGGAGAAGGGAAAAGGAAAGAGATAGAAGTAGGGACAGAATAAGAGGTGGCAAGAGAGATAAAGACCCAGAGAATGAAAGGGATGATAAGCATCGGGCAAGAGATAATATTAAGAAGAGGGAAAGACATGATGATAAATATAGGCACAAAGATAGAGACACTGCTAATGGTAAGAATAGGCATCTGCATCATGAGGATGGTGACGACAATGGAGATAGATATAGAAAACATTCAAGGCATGAAGAAAATGAATATCGTTGGGAAAGAAAAAGAAATTCTGATAATCCTGTAAAGGTTTATAGCTCAATGGGAAGTACTGCAGAAGTGGGTGAAAGCAAACTAACAAGCAGTGAGGTTGAACCAGATGACTTAGAGGAGGATACATTACAATTACCTGAGCAAGAAGAGGAAGATCTCAACAGGATCAAAGAAGAGAGTAGAAGAAGAAGGGAAGCAATAATGGAGAAATACAAGAAGCAGCATCAGCAAGTAGAAGAAGCGGTTGGAAATGAAGGAAACGACAAGAAGGCAGCCATTCCTAATGACATCTCTGAAGCTCGTGATGGTAAAAATGATGATGCTGATTATTTGGAGCCATCATTTGCTGTTGGGAAATCTCCTGAAAATGTGAATGTTGCTTCTAAGAAGATGTCTCCTGCTGGAGGTCTGGGAGAGGGTACTCCAAAGAGTGAAAGGTCAGAGGACAAGTTTTGTGATGATATATTTGGTGAGACGCCAACGGGAGTTCGGAAATCAGGAAAAGGAGATGGTTTACTGATTGAGAGGGCTGGCCTACATGACAATTGGGACGATGCAGAGGGTTATTATAGCTATCGTATTGGTGAAATACTTGATGGCCGATATGAAGTCACTGCTGCACATGGGAGGGGTGTCTTTTCAACAGTTGTTCGCGGAAAGAATCTAAAGATGGGAAATGGTGAGCCAGAAGAAGTAGCCATAAAAATTATTCGTAGTAATGACACCATGTACAAGGCTGGTATGGATGAATTGGTCATATTGAAGAAATTAGTAGGTGCAGATCCAGATGATAAGCGTCATTGTGTTCGTTTCCTTTCAAGTTTTAGATACAGGAATCATCTTTGTTTAGTTTTTGAATCTCTAAATATGAATCTGCGAGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACAGCTGTGAGAGCATACGCAAAACAGCTTTTTATTGCTCTGAAGCATCTCCGGAACTGTGGTGTTCTTCATTGTGATATAAAGCCAGATAATATGTTGGTAAATGAGTCTAAAAATGTTTTGAAGCTTTGTGACTTTGGCAATGCCATGTTTGCTGGTAAAAATGAAGTTACACCATATCTTGTGAGTCGTTTTTATCGTGCCCCGGAAATAATACTTGGCTTGCCATATGATCATCCATTGGATATTTGGTCTGTAGGTTGTTGTTTGTATGAGTTGTATATAGGGAAGGTTCTTTTCCCAGGTCTTACAAACAATGACATGCTACGGCTTCACATGGAACTGAAGGGTCCTTTTCCAAAGAAGATGCTGCGTAAGGGAGCATTTACTGAACAGCATTTTGATCAGGATCTGAATTTTCTTGCTACTGAGGAGGATCCTGTAACAAAAAAGACCATAAAGCGGCTGATACTCAACATTAAGCCAAAAGATATTGGGACACTCATTACTGGCTCTCCTGGGGAGGATCCAAAAATGTTAGCCAACTTTAAGGATCTTCTGGAAAAAGTTTTTGTCTTGGATCCAGACAAGAGGCTGACAGTGTCACAAGCTCTGAACCACCCATTCATCACTGGCAAGTGA 2973 0.4285 MATDARDSRRKHHRSSSPEDVDRSSKRHKHRHNSHRHRHGSKKRDEEVEFDDRTIAAVPSPTPHRYLPDDDVEEGEILEDEALDGEVEKKETESDVEPGEIKVTGDRDVRSDNQNSEPLTKISETRNEDIRDDKFISPAIDAQDDVSPNRSSSETRDGKHAQARTDGVGNGYLDPKSSKGDKWQNGELGHFKGNEKLKGDFHDPTLEANVRKAHYHRNSSSESGGEKYRMSGSSPSHGRYRSRSRSIGHTRDRSRSRSIIDEYPHSKRRRFDYDHDEERVRARGREHGHGSVIDDRREYGIRYHNREARDRDVDRDLHGEKKQEETSRGKEIEWEHKRGKERERSRDRYRRDIEKDRSREREEDRDRRQEKERDRSWDTVMERDRRREKERDRSRDRIRGGKRDKDPENERDDKHRARDNIKKRERHDDKYRHKDRDTANGKNRHLHHEDGDDNGDRYRKHSRHEENEYRWERKRNSDNPVKVYSSMGSTAEVGESKLTSSEVEPDDLEEDTLQLPEQEEEDLNRIKEESRRRREAIMEKYKKQHQQVEEAVGNEGNDKKAAIPNDISEARDGKNDDADYLEPSFAVGKSPENVNVASKKMSPAGGLGEGTPKSERSEDKFCDDIFGETPTGVRKSGKGDGLLIERAGLHDNWDDAEGYYSYRIGEILDGRYEVTAAHGRGVFSTVVRGKNLKMGNGEPEEVAIKIIRSNDTMYKAGMDELVILKKLVGADPDDKRHCVRFLSSFRYRNHLCLVFESLNMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNESKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYIGKVLFPGLTNNDMLRLHMELKGPFPKKMLRKGAFTEQHFDQDLNFLATEEDPVTKKTIKRLILNIKPKDIGTLITGSPGEDPKMLANFKDLLEKVFVLDPDKRLTVSQALNHPFITGK* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2436 990 MobiDBLite consensus disorder prediction 480 497 - -
Gso10g2436 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Gso10g2436 990 MobiDBLite consensus disorder prediction 224 241 - -
Gso10g2436 990 ProSiteProfiles Protein kinase domain profile. 672 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2436 990 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 340 990 - -
Gso10g2436 990 MobiDBLite consensus disorder prediction 122 139 - -
Gso10g2436 990 Gene3D Transferase(Phosphotransferase) domain 1 732 988 - -
Gso10g2436 990 MobiDBLite consensus disorder prediction 245 479 - -
Gso10g2436 990 Coils Coil 531 551 - -
Gso10g2436 990 Gene3D Phosphorylase Kinase; domain 1 642 731 - -
Gso10g2436 990 MobiDBLite consensus disorder prediction 1 530 - -
Gso10g2436 990 Pfam Protein kinase domain 674 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2436 990 SUPERFAMILY Protein kinase-like (PK-like) 659 989 IPR011009 -
Gso10g2436 990 PANTHER DUAL SPECIFICITY PROTEIN KINASE 340 990 - -
Gso10g2436 990 MobiDBLite consensus disorder prediction 1 26 - -
Gso10g2436 990 MobiDBLite consensus disorder prediction 180 223 - -
Gso10g2436 990 CDD STKc_PRP4 671 987 IPR044092 GO:0004674|GO:0006468|GO:0045292
Gso10g2436 990 SMART serkin_6 672 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2436 990 MobiDBLite consensus disorder prediction 83 114 - -
Gso10g2436 990 MobiDBLite consensus disorder prediction 599 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2436 Gso-Chr10 51397362 51403494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2436 625 989 MAP Kinase Gene Family AT2G18170 29.921 1.03e-26 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Gso10g2436 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2436 K08827 - gmx:100784523 1873.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0907 20 38592487 38599391 Gso10g2436 10 51397362 51403494 GST