Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2422 ATGAGACTTTCCATTCTGCAACCCCACCCACACACACACCGGTGCCGCTACCCGATAAAGCAGTGGCCCCGTATGGACGCGTCGTTCCACCGCCGCAAAGACAAGGTGGTGGTGATCATGGGCGCCACCGGCTCCGGCAAGTCCCGTCTCTCCATCGACCTTGCAACCCTCTTCCCCACCTCCGAAATCATCAACTCCGACAAAATGCAAGTCTACCGCGGCCTCGACATCACCACCAACAAGATTCCCACCGCCCAGCGCCACGGCGTCCCCCACCACCTCCTCGGCGACGTCGACACCGATCACTACGGCGAGTTCTCCCCCGCCGACTTCCGCCACCGTGCCGCCGACCTCATCGCCGACATCACCCGACGCAAAAACCTCCCGATCGTCGTCGGCGGCTCCAACTCCTTCGTCCACGCCCTCCTCGTCCAAAACTTCGACCCTCACTCTCACTCAAACGTCTTCCAACAACAACAACAAGAAGAAGCGCTTATATCCTCTGAGTTGAGGTACAGGTGTTGCTTCCTCTGGGTCGATATAGCCTTCCCCGTCTTATCGCAATATTTAAGGGACCGAGTCGACGACATGCTTGACTCGGGGATGGTCGACGAGTTGGCTCAGTTCTTCGACCCGGACGCCGCGCGTCGAACCGGGTTTGGTATCAGAAAAGCCATTGGGGTTCCCGAGTTCGACCGGTTTTTTAATAAATACCCTCCCTCGATGGGCCAGGGGGGCGATGATCCTCTGCGGGAGCGTGCGTACGAGGAGGCGGTGAAGGCGATTAAGGATAACACGTGTGAGTTGGCGGAGCGTCAGATAGGGAAGATCGAACGATTGAAGCGCGCCGGCTGGGACCTACGGAGGATAGACGCGACGGAGGCGTTTCGGATGGTGCTGACGTCAGGGTCGAGCAATGGGTCCGGTGTATGGGAAAGACAGGTGTTGGAACCAAGCGTGAAGATTGTGAAACGCTTCTTGATGGAGTAG 990 0.5828 MRLSILQPHPHTHRCRYPIKQWPRMDASFHRRKDKVVVIMGATGSGKSRLSIDLATLFPTSEIINSDKMQVYRGLDITTNKIPTAQRHGVPHHLLGDVDTDHYGEFSPADFRHRAADLIADITRRKNLPIVVGGSNSFVHALLVQNFDPHSHSNVFQQQQQEEALISSELRYRCCFLWVDIAFPVLSQYLRDRVDDMLDSGMVDELAQFFDPDAARRTGFGIRKAIGVPEFDRFFNKYPPSMGQGGDDPLRERAYEEAVKAIKDNTCELAERQIGKIERLKRAGWDLRRIDATEAFRMVLTSGSSNGSGVWERQVLEPSVKIVKRFLME* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2422 329 Pfam IPP transferase 70 158 - -
Gso10g2422 329 Gene3D - 33 327 IPR027417 -
Gso10g2422 329 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 162 IPR027417 -
Gso10g2422 329 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 183 287 - -
Gso10g2422 329 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 26 328 IPR039657 -
Gso10g2422 329 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 26 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2422 Gso-Chr10 51190680 51192601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2422 39 327 C2H2 Transcription Factor Family AT2G27760 29.211 1.44e-34 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0923 20 38866723 38868944 Gso10g2422 10 51190680 51192601 GST