Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2413 ATGGAAACCACCCAACTTGACTACAACACTAAAAAAACAAACCCCACTTCCCCAACGCGCTTGAAGCTCTTCGGTTTCAGCGTACACCACGAAGACATCATGGACGAAGACGAGGTGGCGCATGATGACGTGGCAGACTCCACCACCAAGGTCACTTCTTCCACTTCCCCTTCTTCCCCGTCTGACTCGCCGGACTCCTCCGTCGCCGGTGCCGGACCACCTTCCTCCGCCGACCGGAAATACGAGTGCCAATACTGCTGCCGAGAGTTCGCAAATTCACAAGCACTTGGCGGACACCAGAACGCGCACAAGAAGGAGCGTCAGCAGCTGAAGCGGGCGCAGTTACAGGCCTCCCGAAACGCCGCCGTTTCGTTCGTTCGGAATCCGATGATCTCCGCCTTCGCCCCTCCGCCGCACCTTCTGGCTCCGCCGGGGACCGTGGTGGTCCCGGCGGCACCTCCCTCGTGGGTGTACGTGCCACCACGTGCCGCGCCTCCTCCCTTCCACGTGTCAGTGTCGCACGGTTGTGCGTTCCCGTCGGCGCATGGCAACAGCAACAACAACGGCTTCAGCAGCAGTAGTAGTAATAATAGTAATAACGTGACCATAACAACGGGTGTGAAATCTGCGGGTGCTGGGATGTTTCCCTATGTTGGCGTTGTAGGAGATTCTTCGTCATTAGCTTTGTCAACGGTGCAGGTTCAGGCCCGGGCCCACCACGCTAGGATTGATGGGCCCTCTTTGAGTAGGTTTTCCAAAGGTGACAGTGGGCCCAAATTTGATGATGCATGGGGCTTGGACTTGCACCTTAGTCTTGCGCCAGCTGCGCCCTCATCTCTCGGCTCGGCTTGA 852 0.5786 METTQLDYNTKKTNPTSPTRLKLFGFSVHHEDIMDEDEVAHDDVADSTTKVTSSTSPSSPSDSPDSSVAGAGPPSSADRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVSFVRNPMISAFAPPPHLLAPPGTVVVPAAPPSWVYVPPRAAPPPFHVSVSHGCAFPSAHGNSNNNGFSSSSSNNSNNVTITTGVKSAGAGMFPYVGVVGDSSSLALSTVQVQARAHHARIDGPSLSRFSKGDSGPKFDDAWGLDLHLSLAPAAPSSLGSA* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2413 283 ProSitePatterns Zinc finger C2H2 type domain signature. 83 103 IPR013087 -
Gso10g2413 283 MobiDBLite consensus disorder prediction 1 20 - -
Gso10g2413 283 PANTHER ZINC FINGER PROTEIN 5 11 277 IPR044299 GO:0010090
Gso10g2413 283 PANTHER ZINC FINGER PROTEIN GIS3 11 277 - -
Gso10g2413 283 MobiDBLite consensus disorder prediction 46 70 - -
Gso10g2413 283 Gene3D Classic Zinc Finger 64 128 - -
Gso10g2413 283 ProSiteProfiles Zinc finger C2H2 type domain profile. 81 108 IPR013087 -
Gso10g2413 283 SUPERFAMILY beta-beta-alpha zinc fingers 78 108 IPR036236 -
Gso10g2413 283 MobiDBLite consensus disorder prediction 34 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2413 Gso-Chr10 51060192 51061324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2413 5 276 C2H2 Transcription Factor Family AT1G68360 43.299 1.16e-53 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2413 - - gmx:100811796 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0934 20 39020632 39021832 Gso10g2413 10 51060192 51061324 GST