Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2409 ATGGCAGCAACACTCTCTCACCTCGTTGCTGTTTTCCATTTTCTTATTCTTCTTCTTCTTCTTCTCATGGTTCAAGGTTTTAGTAACCCTGATTTCGACGCTCTTTTGTCCTTCAAAACCGCTTCAGACACATCCCAAAAGCTCACAACATGGAACATTAACAGCACTAACCCGTGTTCCTGGAAGGGCGTGTCGTGCATTCGCGACCGAGTCTCGCGACTCGTTCTCGAAAACCTCGACCTAGAAGGTTCCATTCACCCCTTAACCTCTCTGACTCAGCTCCGAGTTCTGAGTCTCAAAGGAAACCGTTTCTCCGGTCCCGTTCCAAACCTCTCCAACCTCACCGCTCTAAAACTTCTCTTCCTATCTCGCAATGCCTTCTCCGGCGAGTTTCCGGCGACCGTCAAGTCGCTCTTCCGCCTCTACCGTCTCGATCTGTCCAACAACAACTTCTCCGGCGAGATACCGGCGACGGTCAGCCACTTGACCCACCTCCTCACTCTCCGTCTCGACGGTAACAAGTTCTCCGGCCACATTCCCGATGTGAACCTCCCCGGCCTCCAAGAGTTCAACGTCTCCGGCAACCGTCTCTCCGGCGAGATACCCAAGTCCTTATCAAATTTCCCAGAATCCTCGTTCGGGCAAAACCCGTTTCTCTGTGGAGCCCCAATTAAAAACTGTGCACCCGACCCAACAAAACCCGGATCCGAAGGTGCCATCGCTTCACCACTGGTACCACCCAACAACAACCCAACAACCACTGTATCATCTTCACCAAGTTCAATGCCGAAAACACCAGCATCAGCATCAACAACAAGTAATAAAAGCCACGGAAAGGGTGGTTCGAAGATAAGTCCAGTGGCGCTTATAGCTATTATAGTGTGTGATGTTTTGGTTCTTGCAATAGTGTCATTGCTTCTGTATTGCTACTTCTGGAGGAACTATAAGTTGAAAGAGGGAAAAGGGTCGAAGTTATTTGAGAGTGAAAAGATCGTGTATTCGTCGAGTCCTTACCCTGCTCAGGGAGGGTTTGAGAGGGGTCGAATGGTGTTCTTCGAAGGTGAGAAAAGGTTCGAGCTTGAGGACTTGCTTCGAGCATCCGCGGAAATGCTTGGAAAGGGTGGGTTTGGGACTGCGTACAAAGCGGTGCTCGATGATGGAAATGTGGTTGCGGTGAAGAGACTCAAGGACGCGCAGATTACAGGGAAGAGGGAATTTGAGCAACACATGGAATTGTTGGGAAGGTTGAGACATCCCAATGTTGTTAGTTTGAGGGCTTACTATTTCGCGCGCGAGGAGAAGTTGTTGGTCTATGATTACATGCCCAATGCCACCTTGTTCTGGCTCCTTCACGGGAACCGAGGACCCGGACGAACCCCACTAGACTGGACCACGAGGCTGAAGATAGCAGCGGGAGCGGCGCGAGGTGTGGCTTTCATTCATAACTCGTGCAAGTCCCTTAAACTCACCCACGGTAACATCAAATCCACCAACGTCTTACTCGACAAGCAGGGAAATGCACGCGTGTCTGATTTTGGGCTCTCCGTGTTCGCGGGCCCAGGCCCAGTGGGTGGCAGATCCAACGGCTACCGCGCTCCGGAGGCATCGGAGGGTCGAAAACAGACGCAGAAGTCTGACGTGTACTCTTTCGGTGTGCTCCTGCTGGAGCTGCTCACAGGGAAGTGTCCCTCCGTGGTGGAGAGTGGAGGGAGTGCTTACGGCGGGGTGGTGGACCTACCAAGGTGGGTCCAGTCAGTGGTGAGGGAAGAGTGGACCGCTGAGGTGTTTGATTTGGAGCTGATGAGGTATAAGGATATTGAGGAGGAGATGGTGGGGCTGCTTCAGATTGCGATGACGTGTACCGCGCCTGCACCCGATCAACGGCCCAGGATGACCCACGTGCTCAAGATGATTGAGGAGTTGCGTGGGGTCGAGGTGTCGCCATGTCATGACTCCTTGGATTCGGTGTCTGAGTCTCCTTCCTTGTCTGAAGATGCGTGTGGAACAACCAGTCAGTGA 2019 0.5245 MAATLSHLVAVFHFLILLLLLLMVQGFSNPDFDALLSFKTASDTSQKLTTWNINSTNPCSWKGVSCIRDRVSRLVLENLDLEGSIHPLTSLTQLRVLSLKGNRFSGPVPNLSNLTALKLLFLSRNAFSGEFPATVKSLFRLYRLDLSNNNFSGEIPATVSHLTHLLTLRLDGNKFSGHIPDVNLPGLQEFNVSGNRLSGEIPKSLSNFPESSFGQNPFLCGAPIKNCAPDPTKPGSEGAIASPLVPPNNNPTTTVSSSPSSMPKTPASASTTSNKSHGKGGSKISPVALIAIIVCDVLVLAIVSLLLYCYFWRNYKLKEGKGSKLFESEKIVYSSSPYPAQGGFERGRMVFFEGEKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQITGKREFEQHMELLGRLRHPNVVSLRAYYFAREEKLLVYDYMPNATLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGVAFIHNSCKSLKLTHGNIKSTNVLLDKQGNARVSDFGLSVFAGPGPVGGRSNGYRAPEASEGRKQTQKSDVYSFGVLLLELLTGKCPSVVESGGSAYGGVVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQIAMTCTAPAPDQRPRMTHVLKMIEELRGVEVSPCHDSLDSVSESPSLSEDACGTTSQ* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2409 672 MobiDBLite consensus disorder prediction 243 280 - -
Gso10g2409 672 SUPERFAMILY Protein kinase-like (PK-like) 369 638 IPR011009 -
Gso10g2409 672 ProSiteProfiles Protein kinase domain profile. 365 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2409 672 CDD STKc_IRAK 371 641 - -
Gso10g2409 672 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Gso10g2409 672 PANTHER - 24 657 - -
Gso10g2409 672 MobiDBLite consensus disorder prediction 231 281 - -
Gso10g2409 672 MobiDBLite consensus disorder prediction 649 672 - -
Gso10g2409 672 SUPERFAMILY L domain-like 40 224 - -
Gso10g2409 672 Gene3D Ribonuclease Inhibitor 183 228 IPR032675 -
Gso10g2409 672 Gene3D Ribonuclease Inhibitor 29 182 IPR032675 -
Gso10g2409 672 Pfam Protein kinase domain 369 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2409 672 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Gso10g2409 672 Gene3D Transferase(Phosphotransferase) domain 1 441 654 - -
Gso10g2409 672 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 657 - -
Gso10g2409 672 MobiDBLite consensus disorder prediction 652 672 - -
Gso10g2409 672 Gene3D Phosphorylase Kinase; domain 1 345 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2409 Gso-Chr10 51012954 51016039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2409 31 672 Receptor kinase-like Gene Family AT1G68400 67.830 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso10g2409 Pkinase 4.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2409 - - gmx:100779158 1254.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0938 20 39067532 39070368 Gso10g2409 10 51012954 51016039 GST