Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2406 ATGGCCTCTGGTGAAGGGAGGCGGCGTCATCATGATCTTGTGCCTCTTGCTGCATTGCTCAAGAGAGAGATGAAGAGTGAGAAGATGGAGAAGCCTACTGTGAGGGTTGGACATGCAGCTCAGTCCAAGAAAGGGGAGGATTACTTTCTAATTAAGACTGATTGTCAACGAGTGCCTGGGAACTCTTCATCTTCCTTTTCTGTATATGCGGTTTTTGATGGGCATAATGGAAATGCTGCTGCCATTTTTACTAGGGAGCATTTGTTAAATCATGTGTTGGGTGCTCTTCCTCGAGGGCTTGGACGAGATGAGTGGTTACAAGCTTTACCAAGGGCACTGGTTGCTGGCTTTGTTAAGACTGACAAGGAATTTCAGAGCAGAGGAGAAACTTCTGGAACCACAGCCACATTCGTAATAGTGGATAGGTGGACTGTGACTGTTGCATCAGTTGGAGATTCCCGTTGTATACTAGATACCCAGGGTGGTGCTGTTACCTCCTTAACTGTTGATCACAGACTTGAAGAGAATATTGAAGAGAGGGAACGTGTAACTGCTAGTGGAGGTGAAGTTGGGAGACTTAGCATTGTTGGTGGGGCTGAGATTGGTCCCCTTCGTTGCTGGCCAGGAGGTCTATGCCTTTCTAGGTCAATAGGTGACATGGATGTTGGGGAGTTCATAGTTCCAATACCATATGTCAAACAAGTAAAGCTGTCAAAAGCTGGTGGGAGGCTTGTAATTGCCTCTGATGGCATATGGGATGCTCTATCATCAGAAATGGCTGCAAAATCTTGCCGTGGTTTGCCTGCTGAACTTGCTGCTATGCAGGTTGTCAAGGAAGCACTAAGAACGAGAGGGTTAAAGGATGATACAACTTGCATAGTAGTTGACATTATCCCACCTGATAATGAATTGCCACCAACACCTCCCCCCCCAAAACGGAACAAGCTGAGAGATCTTCTTTCCTTCAGGAAGAGGTCCCGTGATTCTGCCAGTAAGCTGTCAAAAAAGCTTTCAGCTATAAATATAGTGGAGGAACTGTTTGAAGAAGGATCCGCAATGCTTGCTGAAAGATTAGGAAATGATGACAACTTGAACTCAGGGCAATCAACATCTGGCATTTTTGTCTGTGCTGTATGTCAAGTTGATCTTGCTCCAAGTGAGGGCATCTCTGTCCACGCAGGTTCCATTTTCTCCACCAGCTCCAAACCCTGGGAAGGTCCTTTTCTATGTTTTGATTGCCGTGATAAGAAGGATGCTATGGAAGGAAAACGTCCAAGTGGAGTTAAGGTGTCATAG 1296 0.4599 MASGEGRRRHHDLVPLAALLKREMKSEKMEKPTVRVGHAAQSKKGEDYFLIKTDCQRVPGNSSSSFSVYAVFDGHNGNAAAIFTREHLLNHVLGALPRGLGRDEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTSLTVDHRLEENIEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSKAGGRLVIASDGIWDALSSEMAAKSCRGLPAELAAMQVVKEALRTRGLKDDTTCIVVDIIPPDNELPPTPPPPKRNKLRDLLSFRKRSRDSASKLSKKLSAINIVEELFEEGSAMLAERLGNDDNLNSGQSTSGIFVCAVCQVDLAPSEGISVHAGSIFSTSSKPWEGPFLCFDCRDKKDAMEGKRPSGVKVS* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2406 431 CDD PP2Cc 43 297 IPR001932 -
Gso10g2406 431 Pfam Protein phosphatase 2C 61 269 IPR001932 -
Gso10g2406 431 SMART PP2C_SIG_2 51 297 IPR001932 -
Gso10g2406 431 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Gso10g2406 431 PANTHER ALPHABET, ISOFORM E-RELATED 2 430 - -
Gso10g2406 431 SMART PP2C_4 27 295 IPR001932 -
Gso10g2406 431 Gene3D - 35 301 IPR036457 -
Gso10g2406 431 SUPERFAMILY PP2C-like 40 297 IPR036457 -
Gso10g2406 431 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 2 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2406 Gso-Chr10 50988527 50993402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2406 1 430 PP2C-type Phosphatase Gene Family AT1G68410 78.670 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2406 - - gmx:100809663 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0945 20 39139043 39144365 Gso10g2406 10 50988527 50993402 GST