Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2405 ATGTCAACGGTTTATGTGATCCTTTTGTTTTCTCATCTAACGGCGGTGCTTCTGTCAGCCGGGAATGCAAACGGGCACCATGATGAGTGTCCAGACTCATTTGATTGTGGAAGTTTGGGCAGAATTTACTTCCCCTTCACCACGGTACAATACCTGAACTGTGGTGCTTTGGCTATCCATGGTTGTGATGATCATAACCAAACGGCAGTGAAGCGTGTCCAGTTGAACAATGGAGGGAAACTGTTCCAAGTTACACAAGTTAATAGTCATCAGAGGCAGGGGTGGAGACCTAGTATTTCCATTACCGATCATGATTTCAGAATGCTTCTGGTAAATGGTAGTTGTATGGCCTTCACCTACAACATTATCTTCCCTCCCTTCTCTGCTTTCGGTTATTTTGATATGAAAAACAATATAACCTCCTTCAAATGCAGACACAATCAAACAGTCAACCATACAAATGACTTCATCAACTATACAGGATGTCCTTCCTCTGATTTTTACTTTGCCCCTCCATACTCTGATTATGAGTCCTTGCGCTCCTTAATCTCTTCATGTTCAATGGTTAAACTTCCCGTGAGACAAGATTCTCAGTTCTTCAAAGATCCATTTGGATTTTTAACTGCTGAAATTACCTTTGAATTCAAGTTTTCAAATGAATGTCTCCAGTGTTACCATGGAAGAAGAGATGGCAATTGCCGACTTGACAGCAAGGGAAATTTTTATTGCGCCAACAGGAAAGCTAGAGTTTGGACCCGGATTCGGAAGCTAGCATTGATGCTAGGCACCGGCGTAGGACCATGGATCATATTTGGGTTGTTCCTCACGTTACGGCACTGCAAACGAAAATATGGCCAATCCAGCAGCAACACCAATGATGATCCCTACCCAAGTCGTGACACAGAGAGTGACAGGATCTTCTTTGGGGTACCCATCTTCTCCTATATGGAGCTTCTAGAAGCAACAAACAATTTTGACTCCACTAGAAAGCTTGGAGAAGGAGGCTTTGGCACTGTGTACTATGGAACACTAAGAGATGGAAGGGAAGTTGCAATCAAGCATCTGTTTGAGCACAATTACAAGAGAGTGGAACAGTTTATGAATGAAATTGAGATCCTTACTCGCTTACGCCATAGAAATCTTGTGTCCCTTTATGGTTGCACTTCACGTCACGGCCAAGAGCTACTGCTTGTATATGAATACGTTCCTAATGGCACTGTTGCTAGTCATCTTCATGGTGATCTAGCAAGGGTTGGTTTGTTGACATGGCCTATTCGAATGCAAATTGCCATAGACACTGCTTCCGCATTGGCCTATCTCCATGCTTCTAACATCATCCATCGTGAGGTGAAAACCAATAACATTTTACTTGACATCAGTTTTTCGGTTAAGGTAGCAGATTTTGGGCTTTCAAGATTGCTCCCAAATGATGTAAGCCATGTCTCCACAGCTCCACAAGGGTCTCCGGGGTATCTTGATCCAGAATATTTCCAATTCTACAGGCTCACGGACAAGAGTGATGTGTATAGTTTTGGGGTTGTGCTCATGGAGCTGATATCATCCATGCCAGCAGTTGATGCAGCCAGGGAAAGAGATCAAGTTAACTTGGCAAGTTTTTGCATCAAAAAGATTCAAAAAGGAAAGCTTAGTGAGCTTGTAGACCCATCCTTTGGTTTTGAGTCAGACCAACAAGTTAAAAAGATGCTAACTTCAGTGGCAGGATTGGCCTTTCGGTGTGTGCTAGGAGACAATGGATTAAGGCCTTCTATGGATGAAGTTCTGGAAGCACTCAGGAAAATTCAAAGTGGGAATTATGAGTCTGAGAATCTAGAGAAAGGAGATGATGTTGGTGGTGGTGGTGTTACCTCTTCCACTTCCTCCACCGAACAAGTACACGTACTTCAACCACCACCAGCTTCACCGGATTGGGGTCAAGCTGGAATTTCAATGAATAAGTTACCAGCTTCGCCAATGTCCTTGACTGAGAAACGGGAAAGTGAATCTACCACGCCCAATGTCAGTGGTTAA 2028 0.4349 MSTVYVILLFSHLTAVLLSAGNANGHHDECPDSFDCGSLGRIYFPFTTVQYLNCGALAIHGCDDHNQTAVKRVQLNNGGKLFQVTQVNSHQRQGWRPSISITDHDFRMLLVNGSCMAFTYNIIFPPFSAFGYFDMKNNITSFKCRHNQTVNHTNDFINYTGCPSSDFYFAPPYSDYESLRSLISSCSMVKLPVRQDSQFFKDPFGFLTAEITFEFKFSNECLQCYHGRRDGNCRLDSKGNFYCANRKARVWTRIRKLALMLGTGVGPWIIFGLFLTLRHCKRKYGQSSSNTNDDPYPSRDTESDRIFFGVPIFSYMELLEATNNFDSTRKLGEGGFGTVYYGTLRDGREVAIKHLFEHNYKRVEQFMNEIEILTRLRHRNLVSLYGCTSRHGQELLLVYEYVPNGTVASHLHGDLARVGLLTWPIRMQIAIDTASALAYLHASNIIHREVKTNNILLDISFSVKVADFGLSRLLPNDVSHVSTAPQGSPGYLDPEYFQFYRLTDKSDVYSFGVVLMELISSMPAVDAARERDQVNLASFCIKKIQKGKLSELVDPSFGFESDQQVKKMLTSVAGLAFRCVLGDNGLRPSMDEVLEALRKIQSGNYESENLEKGDDVGGGGVTSSTSSTEQVHVLQPPPASPDWGQAGISMNKLPASPMSLTEKRESESTTPNVSG* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2405 675 Gene3D Phosphorylase Kinase; domain 1 298 401 - -
Gso10g2405 675 SUPERFAMILY Protein kinase-like (PK-like) 308 600 IPR011009 -
Gso10g2405 675 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 674 IPR044652 -
Gso10g2405 675 MobiDBLite consensus disorder prediction 619 634 - -
Gso10g2405 675 ProSiteProfiles Protein kinase domain profile. 325 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2405 675 MobiDBLite consensus disorder prediction 652 675 - -
Gso10g2405 675 MobiDBLite consensus disorder prediction 605 675 - -
Gso10g2405 675 Pfam Protein tyrosine and serine/threonine kinase 328 546 IPR001245 GO:0004672|GO:0006468
Gso10g2405 675 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Gso10g2405 675 Gene3D Transferase(Phosphotransferase) domain 1 402 612 - -
Gso10g2405 675 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 7 674 - -
Gso10g2405 675 CDD STKc_IRAK 331 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2405 Gso-Chr10 50969369 50973352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2405 30 675 Receptor kinase-like Gene Family AT1G25390 43.769 2.56e-158 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gso10g2405 PK_Tyr_Ser-Thr 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2405 - - gmx:100778085 1349.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0952 20 39224809 39228022 Gso10g2405 10 50969369 50973352 GST