Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2398 ATGCTCCCTTTTTTTGCTTTGTTCTTTTTTCTTCTTTGCTGCAACTCTCTTGCACCCGTGGTGTATTCTCTGAATGCCGAAGGTTCTGTGCTTTTGACACTGAAGCAGACCCTCACAGACCCACAAGGGTCCATGAGTAACTGGAATTCCTTCGATGAAAACCCTTGTTCATGGAATGGGATCACTTGCAAGGACCAAACTGTTGTGTCCATTAGCTTCCCTAAGAGGAAACTCTATGGCTCTCTTCCTTCTTCTCTGGGATCTCTCTCCCAGCTTCGCCATATCAACTTCAGGAACAACAAGCTCTTTGGAAACTTGCCTCCACGGCTCTTTCAGGCTCAGGGACTTCAAAGCTTGGTGCTTTATGGCAATTCGCTTTCTGGGTCTGTCCCAACTGAGATTCAGAACCTCAGGTACCTTCAAGCTCTAGACTTATCACAAAATTTCTTCAATGGGTCATTGCCTGCTGGAATTGTCCAATGCAAGAGACTCAAAACCCTTATTCTCAGTCAGAACAATTTCACTGGCCCTTTGCCAGATGGGTTTGGTACTGGTTTGTCTTCTCTGGAAAGACTAGACCTTTCTTACAATCACTTCAATGGGTCAATTCCCAGTGACTTGGGAAATCTGTCAAGCCTGCAAGGAACTGTTGATTTGTCTAATAATTATTTTAGTGGTTCAATTCCAGCTAGCCTTGGTAATCTTCCTGAGAAGGTTTACATTGATCTTACGTACAACAATTTAAATGGTCCAATACCCCAAAATGGTGCTTTGATGAATAGAGGGCCAACTGCTTTCATTGGCAATCCTGGTCTATGTGGTCCTCCTTTGAAGAATTCATGTGCTTCTGATACTTCATCTGCTAATTCACCTTCCTCATTTCCATTTATTCCTGATAACTACTCACCTCAGGGTACTGGTAATGGTTCCATGGGAAGTGAGAAAAACAAAGGGCTAAGTAAGGGAGCTGTGGTTGGCATTGTTGTGGGTGATATAATTGGAATTTGCCTTTTAGGTTTGCTGTTCTCTTTTTGCTACTCAAGGGTTTGTGGTTTTAACCAGGATCTGGATGAGAATGATGTTAGCAAGGGAAAGAAAGGGAGGAAAGAATGCTTCTGCTTCAGAAAAGATGACTCTGAGGTCCTATCTGATAATAATGTTGAGCAATATGATCTTGTCCCATTAGATTCCCATGTGAACTTTGATTTGGATGAGCTTCTCAAGGCTTCAGCTTTTGTGCTGGGTAAGAGTGGAATAGGGATTATGTACAAAGTGGTGCTTGAAGATGGACTTGCTTTGGCTGTGAGAAGATTGGGAGAGGGAGGTTCTCAAAGGTTTAAAGAGTTCCAAACAGAGGTAGAAGCAATAGGGAAGTTAAGACATCCAAATATTGCAACTCTGAGAGCCTATTACTGGTCTGTTGATGAGAAGCTTCTCATATATGATTATGTACCCAATGGAAGCCTTGCTACAGCAATTCATGGGAAGGCTGGACTTGACACATTTGTGCCACTATCTTGGTCCTATAGATTGAAAATCATGAAAGGAACTGCGAAGGGATTGCTCTATCTTCATGAATTTAGTCCCAAAAAATATGTCCATGGAGACCTCAAGCCAAGTAACATACTTCTTGGACAAAACATGGAACCCCACATTTCTGACTTCGGAGTTGGGCGCCTTGCAAACATCGCTGGAGGGTCTCCAACCTTGCAATCGAACCGAGTGGCCGCTGAGAAACTACAGGGAAGACAAAAGAGCTTGTCCAATGAAGTCACAAGCAATGTGTTGGGAAACGGTTACATGGCACCAGAAGCAATGAAAGTGGTGAAGCCATCACAGAAGTGGGATGTGTATTCATATGGTGTGATATTGTTGGAAATTATCACAGGAAGATCATCCATTGTGCTAGTGGGGAACTCAGAAATGGACCTTGTTCAGTGGATTCAGTTGTGCATTGAGGAAAAGAAGCCACTCTTGGAGGTGTTAGACCCTTACTTGGGTGAAGATGCAGATAGAGAAGAGGAGATTATTGGAGTTTTGAAGATTGCAATGGCTTGTGTTCATAGCAGCCCTGAAAAGAGGCCTACTATGAGGCACGTGCTTGATGCTTTGGATAAATTGACTATTTCCTCTGATTGA 2139 0.431 MLPFFALFFFLLCCNSLAPVVYSLNAEGSVLLTLKQTLTDPQGSMSNWNSFDENPCSWNGITCKDQTVVSISFPKRKLYGSLPSSLGSLSQLRHINFRNNKLFGNLPPRLFQAQGLQSLVLYGNSLSGSVPTEIQNLRYLQALDLSQNFFNGSLPAGIVQCKRLKTLILSQNNFTGPLPDGFGTGLSSLERLDLSYNHFNGSIPSDLGNLSSLQGTVDLSNNYFSGSIPASLGNLPEKVYIDLTYNNLNGPIPQNGALMNRGPTAFIGNPGLCGPPLKNSCASDTSSANSPSSFPFIPDNYSPQGTGNGSMGSEKNKGLSKGAVVGIVVGDIIGICLLGLLFSFCYSRVCGFNQDLDENDVSKGKKGRKECFCFRKDDSEVLSDNNVEQYDLVPLDSHVNFDLDELLKASAFVLGKSGIGIMYKVVLEDGLALAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNIATLRAYYWSVDEKLLIYDYVPNGSLATAIHGKAGLDTFVPLSWSYRLKIMKGTAKGLLYLHEFSPKKYVHGDLKPSNILLGQNMEPHISDFGVGRLANIAGGSPTLQSNRVAAEKLQGRQKSLSNEVTSNVLGNGYMAPEAMKVVKPSQKWDVYSYGVILLEIITGRSSIVLVGNSEMDLVQWIQLCIEEKKPLLEVLDPYLGEDADREEEIIGVLKIAMACVHSSPEKRPTMRHVLDALDKLTISSD* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2398 712 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 711 - -
Gso10g2398 712 MobiDBLite consensus disorder prediction 284 314 - -
Gso10g2398 712 SMART LRR_typ_2 186 210 IPR003591 -
Gso10g2398 712 SMART LRR_typ_2 89 113 IPR003591 -
Gso10g2398 712 SMART LRR_typ_2 137 161 IPR003591 -
Gso10g2398 712 Gene3D Phosphorylase Kinase; domain 1 378 483 - -
Gso10g2398 712 SUPERFAMILY L domain-like 26 277 - -
Gso10g2398 712 SUPERFAMILY Protein kinase-like (PK-like) 413 704 IPR011009 -
Gso10g2398 712 Pfam Protein kinase domain 414 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2398 712 SMART serkin_6 413 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2398 712 CDD STKc_IRAK 414 707 - -
Gso10g2398 712 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 6 711 - -
Gso10g2398 712 Gene3D Ribonuclease Inhibitor 75 290 IPR032675 -
Gso10g2398 712 Pfam Leucine rich repeat 163 214 IPR001611 GO:0005515
Gso10g2398 712 Pfam Leucine rich repeat 91 148 IPR001611 GO:0005515
Gso10g2398 712 Gene3D Ribonuclease Inhibitor 18 74 IPR032675 -
Gso10g2398 712 ProSiteProfiles Protein kinase domain profile. 408 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2398 712 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Gso10g2398 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Gso10g2398 712 Gene3D Transferase(Phosphotransferase) domain 1 484 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2398 Gso-Chr10 50883566 50886330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2398 1 712 Receptor kinase-like Gene Family AT2G01210 65.512 0.0 953
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso10g2398 Pkinase 2.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2398 - - gmx:100807517 1367.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0961 20 39329271 39332182 Gso10g2398 10 50883566 50886330 GST