Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2394 ATGGAGGCGCAACCGCCAACCCCCTCGACTGCGCCGCCGCCTCTGCCGCCACACCTCAGCTACCCCGACTCCGTGGAATCCTCGCCTCGCTCCCGCAACACCGACTCCTGGGACGAGCCCTTCGCGCCGGCGTCCACCAAGCTCCGTCTCATGTGCAGCTACGGCGGGCACATCGTCCCCCGCCCCCACGACAAGTCCCTCTGCTACGTGGGTGGCGACACGCGCATCATCGTGTCCGAACGCGCCACCTCACTCGCAGACCTCTCCATGCGCCTCTCGAAAACTTTCCTGAACGGAAGACCCTTCACGCTCAAGTACCAGCTCCCCAACGAGGACCTCGATTCCCTCATCTCCGTCACCACCGACGAGGACCTCGAGAACATGATCGACGAGTACGACCGCACCGCCGCCTCCGCCACCTCCGCCGTCAAACCCTCCCGAATCCGCCTCTTCCTCTTTCCCACCAAACCCGAATCCACTCACTCTATCCCTCCCCAAATTCTTGACACGTCAGCCAAATCGGACGATTGGTTTTTGAATGCGTTAAACGGCGCCGGATTGCTTAACCGCGGGTTTTCTGACTCTGCTTCTGTGAATTGCCTTCTTGGACTTGACGACGAGGTTGCCGGGAATAATCTCGAACCCGGTTCGAAGGACGGTGGGGATGGTGGTGGTGGTGGTGGGGTTGGTGGCGGTGGTGCTTCGCAGGGTGGATCTTTCGGGAACGGGAAGAATTTGAAGCAGGATGTTCACTCCATTCCCGATTCGCCCATGCTCGAAACGACGTCGTCGTTTGGGTCCACTTCTTCGTCGCCTTCGCTTGCGAACTTGCCGCCGATTAGGGTTCATGTTGTGGAGGATCAGAAGGTGTTGGGGATTGAGGAGCAGTTCGCGCAGATGGGGGTTGGTGTGGGGCAGAAGCAGCAGCAGCAGGATGAGGGTTTTGTTTTGCTATCTTCGCCGCCTCCCCCGCCGGTTCCCGCGACCCTCGCCGCCGTGGGTGTGCCAATTGGGCCCGCCACGGTGGTTGCTGGGGAGTATCATAACCGCGTTGTCTCCGATGATGAGAGATCAGATCATGGGGTTTCTGTTGGGTATAGAAAACCACCCACTCCTCCACCACAGGTTCAGTCACAGACACAAGCACAGTCACAGGCACAAACGCAAACACTTGCTCCTCAATTTCAACAGAAGTCAACTGGTGGTGGCGCCGTTGTTGATTTGCCTTCTCCTGATTCAGTTTCAAGTGATAGTAGTCTTGCGAATGCAATCTCGCGTTCGAAACCTGCTGTTTATCAAGAACAAGTTCAGATTCAATCCGGGACTACAAGGGTTCCCAGTAACCCTGTGGATCCAAAGCTTAATGTGTCTGATCCGCACGGTCGGATCCAGATGCAGCAACATGTACAGGACCCTGGATATTTGTTGCAACAACAATTTGAACAGCACCAGCAGTTGCAGTCACAACAACCGCAACAGCAATTTGAACAGCAACATCACCAGCACCAGCAGACACTACCGCAACAGCAGCAACAGTTTATTCATGGCACACACTTTATTCACCATAACCCTGCTATTCCTGCATATTATCCTGTATATCCTTCCCAGCAACATCCCCAGCATCCACAGGTTTACTATGTGACTGCGAGACAGGCGCAGGCTTACAACCTGCCTGTGCAGCAGGCTAATATGGGTGAGTCTGCAGGGAACATCGCTTCTAGCCGACCACAAACTCCACCAAATCCTTCTACATTGGTTCAACAACCTGCTACTTACAACCCCATCAGAAATGCTCCCATGCCTAAAACTGAAATGAATGCTTACAGAGCTGCAACTGCAGGCACCCCTCAACTTGTTCAAGTTCCTACGAGCCAACATCAGCAGCAGTATGTCACATACTCACAGATTCACCATCCTTCTCAGTCCATGGCTCCCAATTCTGCTGCCCCTGCCAATTATGCTTTTGATTATGCGGATCCTGCTCATGCTCAAATATACTACTCTCAACCTATGGCACCCACAATGCCTTCACAGTACCAGACTATGATGATGCAGGAAGGTTCAGCTCAGCATCCCTCAGACAGCGTGAAGCAGCAGCAGATAAGAACCTCACAACCATTATAA 2124 0.541 MEAQPPTPSTAPPPLPPHLSYPDSVESSPRSRNTDSWDEPFAPASTKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIIVSERATSLADLSMRLSKTFLNGRPFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTAASATSAVKPSRIRLFLFPTKPESTHSIPPQILDTSAKSDDWFLNALNGAGLLNRGFSDSASVNCLLGLDDEVAGNNLEPGSKDGGDGGGGGGVGGGGASQGGSFGNGKNLKQDVHSIPDSPMLETTSSFGSTSSSPSLANLPPIRVHVVEDQKVLGIEEQFAQMGVGVGQKQQQQDEGFVLLSSPPPPPVPATLAAVGVPIGPATVVAGEYHNRVVSDDERSDHGVSVGYRKPPTPPPQVQSQTQAQSQAQTQTLAPQFQQKSTGGGAVVDLPSPDSVSSDSSLANAISRSKPAVYQEQVQIQSGTTRVPSNPVDPKLNVSDPHGRIQMQQHVQDPGYLLQQQFEQHQQLQSQQPQQQFEQQHHQHQQTLPQQQQQFIHGTHFIHHNPAIPAYYPVYPSQQHPQHPQVYYVTARQAQAYNLPVQQANMGESAGNIASSRPQTPPNPSTLVQQPATYNPIRNAPMPKTEMNAYRAATAGTPQLVQVPTSQHQQQYVTYSQIHHPSQSMAPNSAAPANYAFDYADPAHAQIYYSQPMAPTMPSQYQTMMMQEGSAQHPSDSVKQQQIRTSQPL* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2394 707 MobiDBLite consensus disorder prediction 351 459 - -
Gso10g2394 707 MobiDBLite consensus disorder prediction 685 707 - -
Gso10g2394 707 MobiDBLite consensus disorder prediction 1 40 - -
Gso10g2394 707 MobiDBLite consensus disorder prediction 24 40 - -
Gso10g2394 707 MobiDBLite consensus disorder prediction 411 450 - -
Gso10g2394 707 MobiDBLite consensus disorder prediction 1 20 - -
Gso10g2394 707 Gene3D - 67 153 - -
Gso10g2394 707 MobiDBLite consensus disorder prediction 377 403 - -
Gso10g2394 707 MobiDBLite consensus disorder prediction 212 276 - -
Gso10g2394 707 CDD PB1_UP2 51 153 - -
Gso10g2394 707 MobiDBLite consensus disorder prediction 255 276 - -
Gso10g2394 707 PANTHER OS05G0427100 PROTEIN-RELATED 8 697 - -
Gso10g2394 707 Pfam PB1 domain 63 154 IPR000270 GO:0005515
Gso10g2394 707 PANTHER EXPRESSED PROTEIN 8 697 - -
Gso10g2394 707 MobiDBLite consensus disorder prediction 567 589 - -
Gso10g2394 707 SUPERFAMILY CAD & PB1 domains 63 163 - -
Gso10g2394 707 ProSiteProfiles PB1 domain profile. 47 155 IPR000270 GO:0005515
Gso10g2394 707 MobiDBLite consensus disorder prediction 480 509 - -
Gso10g2394 707 SMART PB1_new 62 153 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2394 Gso-Chr10 50857414 50860076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2394 44 265 MAP Kinase Kinase Kinase AT1G79570 33.628 1.75e-24 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2394 - - gmx:100775954 1182.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0965 20 39360277 39363116 Gso10g2394 10 50857414 50860076 GST