Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2389 ATGGAGAAGGTTTGTGAATTCTGCACAGCTTTGAGGCCACTTGTTTACTGTAAGGCTGATGCAGCATATCTTTGTCTTTCCTGTGATGCAAAGGTGCATTTAGCAAATGCAGTGTCCGGCCGGCACCTCCGGAACCTCGTGTGTAACTCATGCGGATACCACCTTGCTTATGTTCTGTGTTTGGAACACAAAATGTTGATATGTCGTGACTGTGACCAAAAGTTGCACAACATTTCTTTGCCACATAAGAAACGAGCTATCAGAAGTTTCATGGGTTGCCCTTCTGCTAAAGACTTTGCAGCACTCTGGGGGGTTGAATTGAATGAGATTGAAAACAGTGCCAGTCAGGATCAGTTTGATTCAGTTTCTTGTGTTTCTGCAGATTTAAATGTTGCACAAGTTTCAGGAAAGCCTGGCATTCAAACTGAGGTCCCTTCAATGCTATCTGGGGCCAAACTTGATGGGGGAGGATCAACCAGTCAACAAGGTCAGATATTGTATAGTGATCAAAAGCGTCAAACGATTCTGCAGCAGATTATTGATTTTAAATGGCTTCAACAAAATGAGGAGATTGATTATTCTGCAAAGATCAATAGGCTACAAGAAAAAGATTCATCTCCTTCAGTATATCAGACTCTTAAGAAATTGGACGACAAATTCAATGAGCAAGCACAAAATTCCCAAGATCTTGCTACTAATGTTCTGGAAAAAGACTGTCCCATTATGGAGCTGAATCCTGAAACTTTGCCTTCTACGTTTTCTCAACTTGACAATTTATATTCTTCTTCAACTATCGATCTTCCCTTGCATGGAGAATTGTTCTGGACATGCAAAAGTCCACTTCAAAGTAATCAGTTGTGGTCCCAAAATATTCAAGACCTTGGGATATGCAAAGAACTTGTTTGTCAAGATGATTTTAACATCCCTGATGTTGACTTAACTTTCCAAAACTATGAGGAACTATTTGGAGGAGATCAAGATCCAATTAGAATACTGCTTGATGATCAAGATGTCTCCTGCTCTTCTTTAGAGAAGGATAAGTCAGTTGACAAGTCAGTTATTGACAATCCAAGTGCAATGGAGGAATCTTCTGCAGCTGCGTCCATTACTATCTCCCAATCTGATCTTGACAACAAGGATATGAATCCTCTCAGCCAGTACTGTCCAAGAAGCATGGATCCTGCTCATGCAATTCGACCATTTGATTCAACTATACCATTCTCTGTTCTGAGATTCAATGAGGAAAGCAGTTGCACAAACCATGATGACAGTGCCCTTTCTCCCTACAGTGAAGGGAGGGCTTATTCAGGTAGTTAA 1317 0.4085 MEKVCEFCTALRPLVYCKADAAYLCLSCDAKVHLANAVSGRHLRNLVCNSCGYHLAYVLCLEHKMLICRDCDQKLHNISLPHKKRAIRSFMGCPSAKDFAALWGVELNEIENSASQDQFDSVSCVSADLNVAQVSGKPGIQTEVPSMLSGAKLDGGGSTSQQGQILYSDQKRQTILQQIIDFKWLQQNEEIDYSAKINRLQEKDSSPSVYQTLKKLDDKFNEQAQNSQDLATNVLEKDCPIMELNPETLPSTFSQLDNLYSSSTIDLPLHGELFWTCKSPLQSNQLWSQNIQDLGICKELVCQDDFNIPDVDLTFQNYEELFGGDQDPIRILLDDQDVSCSSLEKDKSVDKSVIDNPSAMEESSAAASITISQSDLDNKDMNPLSQYCPRSMDPAHAIRPFDSTIPFSVLRFNEESSCTNHDDSALSPYSEGRAYSGS* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2389 438 MobiDBLite consensus disorder prediction 357 385 - -
Gso10g2389 438 MobiDBLite consensus disorder prediction 351 388 - -
Gso10g2389 438 CDD Bbox1_BBX-like 4 44 - -
Gso10g2389 438 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 422 - -
Gso10g2389 438 MobiDBLite consensus disorder prediction 418 438 - -
Gso10g2389 438 SMART bboxneu5 48 87 IPR000315 GO:0008270
Gso10g2389 438 SMART bboxneu5 1 47 IPR000315 GO:0008270
Gso10g2389 438 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Gso10g2389 438 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2389 Gso-Chr10 50784726 50792481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2389 1 329 C2C2-CO-like Transcription Factor Family AT1G68190 37.538 5.93e-64 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2389 - - gmx:100819787 885.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0972 20 39428134 39434169 Gso10g2389 10 50784726 50792481 GST