Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2381 ATGGAGCAAGAGAATCACAAAATCAAAGCAGTGAGTTTGCTTCGAAGCAGAATCTGTGATCCCAAATTCATCTTCATCAGTGAATCTCCAGAAAGCAACTACAGCAAGCTGAAATTCATGATATCGAGTTCGGTAACGGAAGCATGCAACAATTCTATTCTTCTTCTCGGTCCCCGCGGCTCCGGCAAGAATGCGGTTTTGGAGCTTACAATTCAAGATTTGCTGCAAGAGTATCCGGACTCGGTCTCAGTGATAAGGTTGAATGGGCTTTTACATAGTGATGACATCTCTGCGTTCAAGGAAATAGCTAGGCAGTTATGCATGGAGCATCAATTGCTATTCTCAAAAGCGGCATCATTTGATGACAACTCCCAATTTATGGTGGCCATCCTAAAGGAATGTGGATTAGCACATAAAACAGTAATTTTTGTTCTGGATGAGTTTCACCTGTTTGCTCAGGGTAAACAGAGATTACTCTATAGCTTGCTAGATGCAATGCAATCAATAACATCACAGGCTGTTGTACTTGGCATTAGTTGCCGTCTGGATGCAGATCAGCTGTTGGAGAAAAGGGTACGATCTCGTTTTTCACATAGAAAGCTGTTGTTCCTACCACCTTCAATAGAAGATTCACAAAAATTACTGATGCACATCCTGACATTACCAATTGATTCAAGCTTTCCACATGCTTATGCTGTTGAATTTAACAGAAAGGTCCAAAATATTATAGAAGATAGAAGGTTCAAAGAAACCCTCAATAAATATTTAAATGTTGACTCCTCTGTCAAACATTTGCTGAGGTTCCTATTCTGTGCAGTCTCTCATATGGATTTGCAGACTGGGTTCCTGTCTCGGGAGAACTTTGAAATTGCATTTACAAGTATCCAGAGGCAGCCCAAACTGGAATGTTTAAGAAATTGCTCCATTTTAGAACTCCAAATTTTGGTTTGCATGAAGAGATTGGAAGTTAAAGAGCAAAGTTTATGCAACTTCAATTCTGTGATGAAAGAGTATATAAGCACCCTGACTTCTGAACGTTATGCAAGACATGTCTGCTTAAGGGCATTTGAACACCTTATACATCGTGAATTGATATGTTTCACAGACAATAGAGGACAAAGTTTGTCTGTTGAATTCCGTCCTGTAAAGCTTTTAATTTCATCTGCTGAACTACATCAAGGACTAAGAGCAAATACTTCATGCCCTCCTAAGCTTCTAAAATTAATGGATCGTGAAGGCTAA 1242 0.3953 MEQENHKIKAVSLLRSRICDPKFIFISESPESNYSKLKFMISSSVTEACNNSILLLGPRGSGKNAVLELTIQDLLQEYPDSVSVIRLNGLLHSDDISAFKEIARQLCMEHQLLFSKAASFDDNSQFMVAILKECGLAHKTVIFVLDEFHLFAQGKQRLLYSLLDAMQSITSQAVVLGISCRLDADQLLEKRVRSRFSHRKLLFLPPSIEDSQKLLMHILTLPIDSSFPHAYAVEFNRKVQNIIEDRRFKETLNKYLNVDSSVKHLLRFLFCAVSHMDLQTGFLSRENFEIAFTSIQRQPKLECLRNCSILELQILVCMKRLEVKEQSLCNFNSVMKEYISTLTSERYARHVCLRAFEHLIHRELICFTDNRGQSLSVEFRPVKLLISSAELHQGLRANTSCPPKLLKLMDREG* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2381 413 Gene3D - 30 205 IPR027417 -
Gso10g2381 413 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 214 393 IPR032705 -
Gso10g2381 413 PIRSF ORC4 2 413 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Gso10g2381 413 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 9 412 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Gso10g2381 413 CDD AAA 51 199 - -
Gso10g2381 413 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 262 IPR027417 -
Gso10g2381 413 Pfam AAA ATPase domain 35 168 IPR041664 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2381 Gso-Chr10 50676632 50681030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2381 1 410 Core DNA Replication Machinery Family AT2G01120 63.830 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2381 K02606 - gmx:100800582 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0981 20 39585284 39589961 Gso10g2381 10 50676632 50681030 GST