Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2356 ATGGCGGGTTCTGGCGGGAAAAAGGTGCACCAAATGATCGTCGGTTTCGGCGGCAGTGGCCTCGGCCAGGTTGTCATCGCCGTCGCCGTCTCTTTCCTCGTCCGCGTCTTCTCCGCTCCCGGCCCGGCCCTCTCGCCGGAGAACGAAGCTGACGACGTGCCGGAGAACGATTCCGACGACGCAGAAGCTCCAACTTCCGGCAAGGTCACGCCGGTCACAATCCAGTGGAGAAACATCAATTGCTCCCTTTCTGATAAATCTTCCAAGTCCGGGATTTGTAGAGTTTTTTTTAAAAAAAGAATTGGTGATGATTGGAAGGTGATGTTAAATGAACAGGCGAGGTTTCTGCTTAAAAATGTGAGTGGAGAAGCTAAGCCTGGAAGATTATTAGCCATAATGGGACCTTCAGGTTCAGGGAAGACGACGTTGCTTAATGTTCTTGCGGGTCAGCTAACAGCATCTCCTCGGTTGCATCTGAGTGGCGTTTTGGAGTTCAATGGAAAGCCTGGTTCCAAGAATGCTTACAAGTTTGCTTATGTGAGACAGGAGGATCTCTTTTTCTCGCAGCTCACAGTGCGGGAGACATTGTCTCTTGCTACAGAACTCCAGCTTCCCAACATATCTTCTGCAGAAGAGAGGGATGAATTCGTGAACAATCTCCTTTTCAAACTAGGCTTGGTTAGCTGTGCTGATACCAATGTTGGTGATGCAAAAGTTCGTGGAATTAGTGGTGGTGAAAAGAAACGCTTATCCATGGCATGTGAACTGCTTGCAAGCCCATCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCCTTCCAGGCTGAGAAAGTCATGGAAACTCTCCAACAACTTGCACAAGATGGTCATACTGTAATTTGTTCTATACATCAGCCAAGAGGGTCAGTGTATAGTAAATTTGACGACATCATCTTGCTAACAGAGGGTTCACTTGTTTATGCTGGTCCTGCTCGTGATGAACCACTGGCATACTTCTCAAAATTTGGGTACCAATGTCCAGATCATATAAATCCTGCTGAATTTTTGGCTGATCTTATATCCATAGACTACAGTTCTGCTGATAGTGTCTATACCTCTCAAAAAAGGATTGATGGTCTTGTTGAGTCATTCTCACAAAGACAATCTGCAGTTATATATGCAACTCCAATTACTATAAATGATCTCTCGAACAGTAGAAAAAAAATCAGCCAGAGGGCTGTAGTAAAGAAGAAAGGAGTTTGGTGGAAGCAATTTTGGTTGCTCCTTAAAAGAGCATGGATGCAGGCTTCCCGTGATGCACCAACAAACAAAGTTCGGGCAAGGATGTCAATTGCATCGGCAATTATCTTTGGGTCAGTATTTTGGAGAATGGGAAATTCTCAGACTTCAATACAAGACAGAATGGGATTACTTCAGGTTACTGCAATAAACACAGCTATGGCTGCTCTCACAAAGACTGTTGGTGTGTTTCCAAAGGAACGGGCAATTGTAGATAGAGAACGTGCTAAAGGCTCCTATTCCTTGGGCCCCTATCTGTTCTCAAAATTGTTGGCTGAGATTCCCATTGGAGCAGCATTTCCATTAATGTTTGGTGCTGTTTTGTATCCAATGGCACGTCTTCATCCTACTATGCAAAGATTTGGGAAATTCTGTGGCATTGTTACTATGGAATCTTTTGCTGCATCTGCTATGGGTCTTACTGTTGGTGCTATGGTTCCAACCACTGAAGCAGCAATGGCAGTAGGCCCCTCTCTCATGACAGTTTTTATTGTATTTGGAGGGTACTATGTCAATCCTGAGAATACCCCAATCATCTTCCGTTGGATTCCTAATGTTTCTCTGATTAGATGGGCTTTTCAGGGACTTTCTATCAATGAATTTAGTGGTCTTCAATTTGACCATCAGCATTCATTTGATATTCAAACTGGAGAACAGGCACTAGAGCGTATTTCCTTTGGAAAAAGTAGGATTAGGGATACGGTGATAGCACAAAATAGAATACTGCTATTTTGGTATTGCACCACCTACCTTCTCCTCGAGAAAAACAAGCCCAAATACCAGCAACTTGAAAGCCCTATTGACCACAGCAAACCTCATTTAAAACTTGAGGAGCTCAATTCTGAACAAGTTGATCAGACAATTGAAGCTCCGCCAGTCAGTCAACTTGATTCCAAACAGCCCCTCGAGTCACCTGAAGTAGATCTTGTTGGCTCTTTTGTCCTTGAAGGTACTAAATAG 2244 0.4412 MAGSGGKKVHQMIVGFGGSGLGQVVIAVAVSFLVRVFSAPGPALSPENEADDVPENDSDDAEAPTSGKVTPVTIQWRNINCSLSDKSSKSGICRVFFKKRIGDDWKVMLNEQARFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLTASPRLHLSGVLEFNGKPGSKNAYKFAYVRQEDLFFSQLTVRETLSLATELQLPNISSAEERDEFVNNLLFKLGLVSCADTNVGDAKVRGISGGEKKRLSMACELLASPSVIFADEPTTGLDAFQAEKVMETLQQLAQDGHTVICSIHQPRGSVYSKFDDIILLTEGSLVYAGPARDEPLAYFSKFGYQCPDHINPAEFLADLISIDYSSADSVYTSQKRIDGLVESFSQRQSAVIYATPITINDLSNSRKKISQRAVVKKKGVWWKQFWLLLKRAWMQASRDAPTNKVRARMSIASAIIFGSVFWRMGNSQTSIQDRMGLLQVTAINTAMAALTKTVGVFPKERAIVDRERAKGSYSLGPYLFSKLLAEIPIGAAFPLMFGAVLYPMARLHPTMQRFGKFCGIVTMESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPNVSLIRWAFQGLSINEFSGLQFDHQHSFDIQTGEQALERISFGKSRIRDTVIAQNRILLFWYCTTYLLLEKNKPKYQQLESPIDHSKPHLKLEELNSEQVDQTIEAPPVSQLDSKQPLESPEVDLVGSFVLEGTK* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2356 747 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 99 342 IPR003439 GO:0005524
Gso10g2356 747 PANTHER ABC TRANSPORTER G FAMILY MEMBER 7 3 697 - -
Gso10g2356 747 PANTHER ATP-BINDING CASSETTE TRANSPORTER 3 697 - -
Gso10g2356 747 ProSitePatterns ABC transporters family signature. 242 256 IPR017871 GO:0005524
Gso10g2356 747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 328 IPR027417 -
Gso10g2356 747 SMART AAA_5 126 319 IPR003593 -
Gso10g2356 747 Pfam ABC-2 type transporter 419 629 IPR013525 GO:0016020|GO:0140359
Gso10g2356 747 MobiDBLite consensus disorder prediction 44 67 - -
Gso10g2356 747 CDD ABCG_EPDR 71 324 - -
Gso10g2356 747 Pfam ABC-2 type transporter 299 368 IPR043926 GO:0140359
Gso10g2356 747 Gene3D - 104 331 IPR027417 -
Gso10g2356 747 Pfam ABC transporter 117 269 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2356 Gso-Chr10 50493581 50501271 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2356 116 324 Calmodulin-binding Proteins AT2G36910 27.700 5.15e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2356 K05681 - gmx:100788256 1414.82