Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2340 ATGGCTACGTTTTCAATTGGGACACACTTGCCCATGTTCCAGCATTTGCATAATTCTAGACTTCCACTTCTTGGCCTTTGCACCGTTGAATCTTCACCCTTCTTTGGCTCCTCTTCTTGCAGAACCAGATTCGCAGGTGCCATCCCCACGTTGCTCCGTCACAATGTATTGGCACGTGCCGAAGATAAGGCCAGAGACCCTACACCTTCTTCCTTTCAGCCTCAACAAAGTTCTCAGCAACAGTTTCAGAACTTAACACCAGAATCTGGGAGTTGTGATCCCCTATGTTCACTCGATGAAACAAGCTCACAAGAGTTTGAAGACAGCTACCAGCCCAAGACTGATTTCCTCAAAGCTGTTGCAATATTAGCAACAGCTGCAACTGGGGCAGTGGCAATTAATCATTCTTGGGTAGCCACTAATCAGGATCTTGCTATGGCATTGCTATTTGTAATAGGATATGCAGGCATCATATTTGAAGAATCTCTAGCCTTCAATAAAAGTGGAGTGGGACTGTTGATGGCTGTAAGCTTATGGGTGATACGGAGTATTGGGGCTCCATCAACTGATATAGCTGTTTCAGAGCTTACACATGCATCTGCAGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGTGCAATGACCATTGTTGAGATCGTTGATGCTCATCAAGGATTTAAGCTGGTTACTGACAATATAACAACCCGAAACCCACGCCTTCTCCTCTGGGTGATTGGAATTGTTACATTTTTTCTCAGTTCAGTTCTAGACAACCTGACATCCACCATAGTTATGGTTTCTCTGTTGCGGAAATTGGTGCCTCCATCAGAGTACCGAAAGATTCTTGGAGCTGTTGTTGTAATAGCAGCAAATGCGGGGGGTGCATGGACTCCTATTGGTGATGTTACAACTACTATGCTGTGGATACATGGGCAAATATCTACAGTTCAAACAGTGAAGGATTTGTTTGTACCTTCAGCCGTTTCTCTAGCTGTTCCACTGGCTCTAATGTCCCTGACAAGTGAAGTTAATGGGAAGGGACAAAATTCTCCCAATGTCTTGGCATCGGAACAGATTGCTCCTCGAGGACAGCTTGTTTTCTCTGTGGGTTTAGGAGCTTTGATTTTTGTCCCAGTATTCAAGGCTCTTACAGGTTTGCCTCCATACATGGGGATGCTGCTTGGACTCGGTGTGCTTTGGATCCTCACAGATGCTATCCATTACGGTGAATCTGAAAGGCAGAAGCTAAAAGTACCCCAGGCTCTCTCAAGGATAGACACCCAAGGAGTACTATTCTTTCTGGGAATTCTATTATCCGTTAGCAGCCTGGAGGCAGCTGGGATTCTTCGGGAAATAGCAAACTACCTTGATGCACATGTGCCAAGTAGTGAACTGATTGCCAGTACTATTGGACTCATATCTGCAGTAATAGACAATGTTCCATTGGTTGCTGCCACAATGGGAATGTATGATGTCACTTCTTTCCCTCAGGATTCTGAGTTCTGGCAATTGATTGCATTTTGTGCTGGTACTGGTGGATCCATGTTAATTATTGGCTCAGCTGCTGGAGTTGCGTTCATGGGGATGGAAAAGGTGGACTTCTTTTGGTACTTACGAAAGATTAGTGGCTTTGCTTTTGCAGGTTATGCTGCTGGTATCGTTGCCTATTTAGCTCTCCATAAACTCAACATCTCCCTACCAACTCTAGCAGAGGTTCCTTTCCTTTCTGGTTCATAA 1737 0.4467 MATFSIGTHLPMFQHLHNSRLPLLGLCTVESSPFFGSSSCRTRFAGAIPTLLRHNVLARAEDKARDPTPSSFQPQQSSQQQFQNLTPESGSCDPLCSLDETSSQEFEDSYQPKTDFLKAVAILATAATGAVAINHSWVATNQDLAMALLFVIGYAGIIFEESLAFNKSGVGLLMAVSLWVIRSIGAPSTDIAVSELTHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRNPRLLLWVIGIVTFFLSSVLDNLTSTIVMVSLLRKLVPPSEYRKILGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTVQTVKDLFVPSAVSLAVPLALMSLTSEVNGKGQNSPNVLASEQIAPRGQLVFSVGLGALIFVPVFKALTGLPPYMGMLLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGVLFFLGILLSVSSLEAAGILREIANYLDAHVPSSELIASTIGLISAVIDNVPLVAATMGMYDVTSFPQDSEFWQLIAFCAGTGGSMLIIGSAAGVAFMGMEKVDFFWYLRKISGFAFAGYAAGIVAYLALHKLNISLPTLAEVPFLSGS* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2340 578 Pfam Citrate transporter 155 510 IPR004680 GO:0016021|GO:0055085
Gso10g2340 578 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 1 578 IPR045016 GO:0006814|GO:0015297
Gso10g2340 578 PANTHER BNAC03G40960D PROTEIN 1 578 - -
Gso10g2340 578 MobiDBLite consensus disorder prediction 62 90 - -
Gso10g2340 578 MobiDBLite consensus disorder prediction 68 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2340 Gso-Chr10 50348053 50353451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2340 1 578 Antiporters AT3G19490 75.170 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2340 - - gmx:100779521 1053.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1017 20 39953497 39954911 Gso10g2340 10 50348053 50353451 GST