Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2337 ATGGGTAGTCTTGAAGCGGAAAGAACAACAGTAGGATTGGCAGCAAGAGACCCTTCAGGGATTCTCTCCCCATACACCTACAATCTAAGAAACACAGGCCCTGATGATGTTTACATTAAAGTTCACTACTGTGGAGTTTGCCATTCTGATCTCCACCAGATTAAAAATGATCTTGGCATGTCCAACTATCCCATGGTCCCAGGACATGAAGTGGTTGGTGAGGTACTGGAGGTGGGATCAAACGTTAGCAGGTTCAGAGTGGGAGAGTTGGTGGGAGTTGGACTCCTCGTAGGTTGCTGCAAAAACTGCCAGCCATGCCAACAAGACATTGAGAATTACTGCAGCAAGAAGATCTGGTCTTACAATGATGTTTATGTCGATGGAAAACCCACACAGGGTGGCTTTGCTGAAACCATGATCGTTGAGCAAAAGTTTGTGGTGAAGATTCCAGAGGGTTTGGCGCCAGAGCAAGTGGCACCATTACTGTGTGCGGGTGTGACAGTGTACAGTCCACTGGTACACTTTGGGCTGAAGGAGAGTGGGCTAAGAGGTGGAATATTGGGGCTTGGAGGAGTGGGACACATGGGGGTGAAGATAGCAAAGGCACTGGGTCATCATGTGACTGTGATAAGCTCTTCTGACAAGAAGAAACAAGAGGCACTTGAACACCTTGGAGCTGATCAATATCTCGTTAGCTCTGATGCCACTGCCATGCAGGAAGCTGCTGATTCACTTGACTACATCATTGACACTGTGCCTGTTGGTCACCCTCTTGAGCCTTATCTCTCCTTGCTCAAACTTGATGGCAAGTTGATCTTGATGGGGGTCATCAACACCCCTCTTCAATTTGTTAGCCCCATGGTCATGCTAGGGAGGAAGTCAATAACGGGAAGCTTCATTGGGAGCATGAAGGAGACAGAGGAGATGTTGGAGTTCTGGAAAGAGAAGGGTCTGAGTTCGATGATTGAAATGGTAAACATGGATTACATTAACAAAGCCTTTGAAAGGTTGGAGAAGAATGACGTGAGATACAGGTTTGTTGTGGATGTCAAAGGCAGCAAACTTGTTGATCAGTAA 1077 0.4689 MGSLEAERTTVGLAARDPSGILSPYTYNLRNTGPDDVYIKVHYCGVCHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVSRFRVGELVGVGLLVGCCKNCQPCQQDIENYCSKKIWSYNDVYVDGKPTQGGFAETMIVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLVHFGLKESGLRGGILGLGGVGHMGVKIAKALGHHVTVISSSDKKKQEALEHLGADQYLVSSDATAMQEAADSLDYIIDTVPVGHPLEPYLSLLKLDGKLILMGVINTPLQFVSPMVMLGRKSITGSFIGSMKETEEMLEFWKEKGLSSMIEMVNMDYINKAFERLEKNDVRYRFVVDVKGSKLVDQ* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2337 358 PANTHER ALDEHYDE REDUCTASE 4 355 - -
Gso10g2337 358 CDD CAD1 11 349 - -
Gso10g2337 358 Pfam Zinc-binding dehydrogenase 191 312 IPR013149 -
Gso10g2337 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Gso10g2337 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 154 318 IPR036291 -
Gso10g2337 358 Gene3D - 164 320 - -
Gso10g2337 358 SUPERFAMILY GroES-like 16 181 IPR011032 -
Gso10g2337 358 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 4 355 - -
Gso10g2337 358 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Gso10g2337 358 Pfam Alcohol dehydrogenase GroES-like domain 34 149 IPR013154 -
Gso10g2337 358 Gene3D - 14 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2337 Gso-Chr10 50307750 50310153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2337 1 358 Monolignol Biosynthesis Gene Families AT3G19450 77.716 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2337 K00083 - gmx:100777558 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1020 20 40018312 40020349 Gso10g2337 10 50307750 50310153 GST