Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2331 ATGAGCCTTTACTCTCAGAATCTCCATTTGTGGTGGAGACTCTCATCCTTCCTTCTTCTACTTGTTCAATCTGTTACATCTCAATTTGTTGCATTTACATCTCTTAACTCTGATGGGATTCACTTGCTTAAATTCAAATATTCCATCCTCAACGACCCGTTATCAGTCTTAGAGAACTGGAACTACGAGGATGCAACACCATGTTCATGGCATGGTGTTGCATGCAGTGAAATTGGAGCCCCTGGCACCCCTGACTTTTTCAGAGTAACTAGCTTGGCCCTTCCCAATAGCCAACTTTTAGGTTCCGTTTCTGAAGACTTAGGCTTGATCCAATACCTTCGCCACATCGATCTCTCCAACAATTTCCTTAATGGCTCTCTACCCAACACTATCTTCAACTCTTCTCAACTTCAAGTACTTTCCCTCTCAAACAATGTTATCTCAGGCAAACTACCTGAGCTAATTGGCAAAATGACAAACCTTAAACTTCTCAACCTCTCTGACAATGCCTTTTCCGGTTTGATCCCAGAAAACCTCTCTACTCTACCAAACTTAACCGTTGTTTCACTGAAGAGTAACTACTTTTCTGGCAGTGTCCCAACCGGGTTCAACTACGTGGAGATTCTGGATCTGTCATCCAATTTGCTCAACGGATCTTTGCCAAATGAATTCGGCGGCGAAAGCTTGCGCTACTTGAACCTCTCTTACAACAAGATTTCGGGAACAATACCACCAGCATTTGCGAAACAGATTCCTGTAAACACAACAATGGACCTCTCATTCAACAATCTGACAGGACCAATACCAGGGTCTGAGGCTTTGCTCAACCAGAAGACAGAGTTTCTATCAGGGAATGCTGATCTTTGTGGTAAGCCTCTGAAGATTCTTTGCACTGTTCCCTCTACTATGTCCTCTGCTCCACCCAATGTCACCACATCTTCACCAGCCATTGCAGCCATACCAAAAACAATTGACTCAACCCCTTCAACAAACACATCAGGAACCACCACCAGTTCTCAGAATGTCTCACCAAGTGGCCTAAAACCCGCCACCATAGCAGCAATTGTGGTAGGAGACTTAGCTGGCATGGCCCTTTTGGCTCTCATCATTCTCTTCATCAACCAACAGAGAAAGAAACGATATCCAAATCCAAAACCAAACACTAATGCTTCTTCCGCCAACAACCCAGAAAAGAAACAAGAAACTGTTTCAAGACAAGATGCGGAGGCGAGAACTATAACACCTTCACTTCCTTGTTCCTGCTTAACAATCAAAGAAGAAGAAACTTCAGAAGCAACGAGCTCCGACAGTGACCGCGAGAGCAACACCGCAGTGAACATCATGGCAGCACAAAACGGGAACCTTCCGAGACACGGCACTCTTGTGACCGTGGACGGGGAGACAAATTTGGAGCTTGAGACTTTGCTCAAGGCTTCAGCGTATATTTTGGGAAACAGCCACTTCAGCATTGTTTACAAGGCGGTGCTGGAGGACGGAAGATCCTTTGCTGTTAGAAGGATCGGTGAGTGTGGGATTGAGAGAAGGAAGGATTTTGAGAACCAAGTTCGTGCCATTGCAAAGCTTCGCCATCCGAATTTGGTTACGGTTCGTGGCTTCTGCTGGGGCCAAGAAGATAAACTCCTAATATGTGACTATGTCCCTAATGGAAGCCTCGCCACCATAGATCACAGAAGAGCAAGTACATCCCCAATGAACTTGTCCTTGGAGGTGCGGTTGAAGATAGCGAAAGGGGTGGCACGAGGGTTGGCTTTCATTCATGAGAAGAAACACGTGCATGGCAACGTTAAACCCAGCAACATCTTGTTAAACTCGGAAATGGAACCCATCATAAGCGATTTTGGGCTGGACCGGCTCCTCTTGAATGACGTAACCCAAAGAGCGAACGGTTCGGCAAGACAATTAATGGGGAACCAAAGAAACCAACAAGACCTGCCATTCGTAACAATGGGACCATCCACTAGCGGTGTGGGTCAAATAATGCACTATCAAGCACCAGAGTCACTTCAAAACATCAAACCCAATAACAAGTGGGACGTGTACTCTTTTGGCGTGGTCTTGCTGGAGCTTCTAACTGGGAGGGTTCTCTCGGACCGGGAGTTGGACCAGTGGCACGAACCGGGTTCGGTGGAAGATGAGAAAAACCGGGTCTTGAGGATAGCTGACGTGGCAATGAAGTCTGAAATAGAAGGGAGAGAGAATGTGGTATTGGCGTGGTTCAAGTTGGGGATTAGCTGTGTTTCCCATGTCCCACAAAAGAGACCGTCCATGAAAGAGGCTCTACAAATCTTAGACAAAATCCCCGGTGCTGCTCCAGTCCATTAA 2343 0.4631 MSLYSQNLHLWWRLSSFLLLLVQSVTSQFVAFTSLNSDGIHLLKFKYSILNDPLSVLENWNYEDATPCSWHGVACSEIGAPGTPDFFRVTSLALPNSQLLGSVSEDLGLIQYLRHIDLSNNFLNGSLPNTIFNSSQLQVLSLSNNVISGKLPELIGKMTNLKLLNLSDNAFSGLIPENLSTLPNLTVVSLKSNYFSGSVPTGFNYVEILDLSSNLLNGSLPNEFGGESLRYLNLSYNKISGTIPPAFAKQIPVNTTMDLSFNNLTGPIPGSEALLNQKTEFLSGNADLCGKPLKILCTVPSTMSSAPPNVTTSSPAIAAIPKTIDSTPSTNTSGTTTSSQNVSPSGLKPATIAAIVVGDLAGMALLALIILFINQQRKKRYPNPKPNTNASSANNPEKKQETVSRQDAEARTITPSLPCSCLTIKEEETSEATSSDSDRESNTAVNIMAAQNGNLPRHGTLVTVDGETNLELETLLKASAYILGNSHFSIVYKAVLEDGRSFAVRRIGECGIERRKDFENQVRAIAKLRHPNLVTVRGFCWGQEDKLLICDYVPNGSLATIDHRRASTSPMNLSLEVRLKIAKGVARGLAFIHEKKHVHGNVKPSNILLNSEMEPIISDFGLDRLLLNDVTQRANGSARQLMGNQRNQQDLPFVTMGPSTSGVGQIMHYQAPESLQNIKPNNKWDVYSFGVVLLELLTGRVLSDRELDQWHEPGSVEDEKNRVLRIADVAMKSEIEGRENVVLAWFKLGISCVSHVPQKRPSMKEALQILDKIPGAAPVH* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2331 780 CDD TM_EGFR-like 351 380 - -
Gso10g2331 780 Gene3D Transferase(Phosphotransferase) domain 1 553 777 - -
Gso10g2331 780 ProSiteProfiles Protein kinase domain profile. 477 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2331 780 SUPERFAMILY Protein kinase-like (PK-like) 482 772 IPR011009 -
Gso10g2331 780 PANTHER OS04G0122200 PROTEIN 30 775 - -
Gso10g2331 780 MobiDBLite consensus disorder prediction 306 345 - -
Gso10g2331 780 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 30 775 - -
Gso10g2331 780 Gene3D Ribonuclease Inhibitor 35 204 IPR032675 -
Gso10g2331 780 Gene3D Ribonuclease Inhibitor 205 299 IPR032675 -
Gso10g2331 780 CDD STKc_IRAK 483 773 - -
Gso10g2331 780 Pfam Leucine rich repeat N-terminal domain 36 76 IPR013210 -
Gso10g2331 780 SUPERFAMILY L domain-like 40 295 - -
Gso10g2331 780 Pfam Leucine Rich Repeat 113 131 IPR001611 GO:0005515
Gso10g2331 780 Pfam Leucine Rich Repeat 228 248 IPR001611 GO:0005515
Gso10g2331 780 MobiDBLite consensus disorder prediction 379 410 - -
Gso10g2331 780 Pfam Protein kinase domain 482 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2331 780 Gene3D Phosphorylase Kinase; domain 1 457 552 - -
Gso10g2331 780 MobiDBLite consensus disorder prediction 380 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2331 Gso-Chr10 50273638 50277342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2331 34 773 Receptor kinase-like Gene Family AT2G15300 51.910 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso10g2331 Pkinase 6.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2331 - - gmx:100820334 1454.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1024 20 40052467 40056000 Gso10g2331 10 50273638 50277342 GST