Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2323 ATGGAGGCGAAGAAGGAATATGAAGTGGACCATCTGAGCACACCCACAGGGACCAGTTTCTCTCAGTTACTATTCGGAGATGACGACGACGACGTTGATGAAAGTGCATTGGGTCTCGCTGTGGACCAGTCTTACTCTTACAATTACAACAACCTTACCCGTTCACCTCTTTTCTCCATTCACAAGGCACCCCAAATGCTTTGTTTTGGCAACCATCAAAACGAAGAAGGTGACGTTTTGCTTCCTGAAACCAACTTAACCCCTCAGAAATCTGTCATCACTTCTAGTGACTCCTCTTCTGCTAGCGCTTCCTCCTGCAACCACACCAACACCGCCTTCAATTCCTTACCTAAGTCTAATAATAGTTTGCAGAAAAAGCGACAAGAAGGAGTTGCCAAGGTTGGTGTTGGAAGCCAGAGACAAACTAAAAAGAACAAAGCAGAGAACCCCACCTCAACCGGACATGCAAAGAGGAAGGAGAAGCTCGGAGAACGAATTGCAACGTTACAACAACTTGTTTCTCCCTTTGGAAAGACAGATACAGCATCAGTGCTTCACGAGGCCATGGGTTATATAAGATTTCTTCATGACCAAGTTCAGGTCCTGTGCTCTCCTTACTTGCAAAGTTTGCCTTCCTCATACCATCAAAATCAGCACGGGGGCGGAGGTAACAATGAAGAGGAAGTGAACAAGGACTTGAGGAGTAAGGGTCTTTGCTTGATCCCTGTGGGATGCACCGTACACGTGGCAGGTAGCAATGGTGCTGATTTTTGGTCATCTGCTGCAATAGGGAACAATGTTAGTTTCACCATCAGCCAAGCAGTGAAACGAAACCAAGATCAATGA 846 0.4622 MEAKKEYEVDHLSTPTGTSFSQLLFGDDDDDVDESALGLAVDQSYSYNYNNLTRSPLFSIHKAPQMLCFGNHQNEEGDVLLPETNLTPQKSVITSSDSSSASASSCNHTNTAFNSLPKSNNSLQKKRQEGVAKVGVGSQRQTKKNKAENPTSTGHAKRKEKLGERIATLQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQSLPSSYHQNQHGGGGNNEEEVNKDLRSKGLCLIPVGCTVHVAGSNGADFWSSAAIGNNVSFTISQAVKRNQDQ* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2323 281 CDD bHLH_AtbHLH_like 157 202 IPR045239 -
Gso10g2323 281 MobiDBLite consensus disorder prediction 90 160 - -
Gso10g2323 281 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 146 195 IPR011598 GO:0046983
Gso10g2323 281 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 62 253 - -
Gso10g2323 281 MobiDBLite consensus disorder prediction 90 127 - -
Gso10g2323 281 PANTHER BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED 62 253 - -
Gso10g2323 281 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 207 IPR036638 GO:0046983
Gso10g2323 281 Gene3D - 137 217 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2323 Gso-Chr10 50206164 50212619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2323 157 259 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 57.692 3.64e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2323 - - gmx:100809107 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1032 20 40115520 40118166 Gso10g2323 10 50206164 50212619 GST