Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2318 ATGATGATCACAGAAGATGAAACGACTCTTACAGCAAGCAAAGAACAACAAAGTGAAATGATGAACGGAGACAAGGACAATCATGGAAGCGAAGATGACAACTCCAAAGAGTGGTTGAACCTGAGCATAGGTGGAACTACTACTTTACTCTCAACAGCTGTACCACCAGCCACTGCCAAAGTTTTTTCATGCAACTTCTGCATGAGGAAGTTCTTTAGCTCACAGGCACTAGGAGGCCATCAGAACGCTCACAAGAGGGAAAGGGGTGCTGCCAGAAGATACCAATCTCAGAGGTCGATGGCAATAATGGGATTCTCCATGAACACACTAACTATGTGTCGATCACTTGGTGTTCAGCCACACTCACTTGTGCACAAGCCATGCAGAGATGGTATCATGGTGGCACCGAGCTTTCATGATGCATATGCAAGGATTGGGATGGCATGGACACCTTTCTGGACCGAGGATCAAGCGGATATGGTGTGGCCAGGCAGCTTTCGCTTGGTTCCAAAACAGCCACAGTCACCACAGGAGCCACTCAAGCTTGATTTAGACCTCAGACTCTGA 567 0.4762 MMITEDETTLTASKEQQSEMMNGDKDNHGSEDDNSKEWLNLSIGGTTTLLSTAVPPATAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQRSMAIMGFSMNTLTMCRSLGVQPHSLVHKPCRDGIMVAPSFHDAYARIGMAWTPFWTEDQADMVWPGSFRLVPKQPQSPQEPLKLDLDLRL* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2318 188 PANTHER ZINC FINGER PROTEIN 4-LIKE 5 188 - -
Gso10g2318 188 Gene3D Classic Zinc Finger 46 109 - -
Gso10g2318 188 MobiDBLite consensus disorder prediction 1 37 - -
Gso10g2318 188 ProSiteProfiles Zinc finger C2H2 type domain profile. 62 89 IPR013087 -
Gso10g2318 188 MobiDBLite consensus disorder prediction 19 35 - -
Gso10g2318 188 ProSitePatterns Zinc finger C2H2 type domain signature. 64 84 IPR013087 -
Gso10g2318 188 PANTHER ZINC FINGER PROTEIN 4-LIKE 5 188 - -
Gso10g2318 188 SUPERFAMILY beta-beta-alpha zinc fingers 59 88 IPR036236 -
Gso10g2318 188 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2318 Gso-Chr10 50181171 50182736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2318 57 176 C2H2 Transcription Factor Family AT1G24625 43.548 1.06e-21 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2318 - - gmx:100306296 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1037 20 40151736 40154111 Gso10g2318 10 50181171 50182736 GST