Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2282 ATGCCCTCCTCATCAACAATGCCTCTCTCGCCGGACCCTCCCTTCCTCTGCGCCGATGAGGCCGCCATCGCCGGACTCCTCGACGCCGAGCCACACCACATGCCGGAAAAGGACTACCTCCGCCGCTGCCGCGAACGCTCCGTCGACGTCACCGCCCGCTTGGACGCCGTCAACTGGATCTTAAAGGTCCACGCATACTACGAGTTTTCCCCAGTAACGGCGTTTCTCTCCGTCAACTATTTCGACCGTTTCCTCTCTCGATGCTCTCTTCCGCAACAAAGTGGTGGGTGGGCGTTTCAGCTGTTATCAGTGGCATGTTTGTCTCTAGCAGCGAAAATGGAGGAGTCCCATGTGCCTTTCTTACTGGACCTGCAATTGTTTGAGCCCAAGTTCGTCTTCGAGCCCAAAACGATTCAGAGAATGGAACTCTGGGTTATGTCTAATCTCAAATGGAGACTCCGCTCTGTCACCCCCTTCGATTATCTTCATTATTTCATCTCCAAGCTTCCTTCTTCCTCTTCTTCCCAATCCTTGAATCACTTTTTCTCCACTTCCTCCAACCTCATTCTCAGCACCACTCGTGTGATTAACTTCTTGGGATTTGCGCCATCCACCGTCGCAGCCGCCGCCGTGCTCTGCTCCGCCAACGGCCAATTGCCGCTGAGTTTTCATGACAGAGTAAACGATGAAATGGTGAGATGCTGTCACCAACTAATGGAGGAGTACGTGGTGGACACGTGTCCCGCATCCGTTAAAGCCAGAATAACCGAGCCGGCGCCGCCGTCCAGCCCCGTCGGCGTGCTCGACGCCGCCACCTGTGGGAGCTGCGACACACCTTCCGATAGGAATTTCGCTGGGCCGCCAAATAAACGGCTTCGATCCTCTGCTTCGGATGCACCGCAGCGGTAG 909 0.5545 MPSSSTMPLSPDPPFLCADEAAIAGLLDAEPHHMPEKDYLRRCRERSVDVTARLDAVNWILKVHAYYEFSPVTAFLSVNYFDRFLSRCSLPQQSGGWAFQLLSVACLSLAAKMEESHVPFLLDLQLFEPKFVFEPKTIQRMELWVMSNLKWRLRSVTPFDYLHYFISKLPSSSSSQSLNHFFSTSSNLILSTTRVINFLGFAPSTVAAAAVLCSANGQLPLSFHDRVNDEMVRCCHQLMEEYVVDTCPASVKARITEPAPPSSPVGVLDAATCGSCDTPSDRNFAGPPNKRLRSSASDAPQR* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2282 302 Pfam Cyclin, N-terminal domain 28 153 IPR006671 -
Gso10g2282 302 ProSitePatterns Cyclins signature. 53 84 IPR006671 -
Gso10g2282 302 Gene3D - 36 154 - -
Gso10g2282 302 PANTHER CYCLINS 18 279 IPR039361 -
Gso10g2282 302 PANTHER CYCLIN-D2-1-LIKE 18 279 - -
Gso10g2282 302 SMART Cyclin_C_2 156 264 IPR004367 -
Gso10g2282 302 MobiDBLite consensus disorder prediction 278 302 - -
Gso10g2282 302 SUPERFAMILY Cyclin-like 21 153 IPR036915 -
Gso10g2282 302 SMART cyclin_7 58 147 IPR013763 -
Gso10g2282 302 Pfam Cyclin, C-terminal domain 156 243 IPR004367 -
Gso10g2282 302 CDD CYCLIN 53 143 IPR013763 -
Gso10g2282 302 Gene3D - 26 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2282 Gso-Chr10 49884344 49886523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2282 22 246 Core Cell Cycle Gene Families AT1G70210 47.034 6.20e-65 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2282 K18810 - gmx:100798996 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1076 20 40497391 40499452 Gso10g2282 10 49884344 49886523 GST