Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2265 ATGGGCTGTGCTATCATTAACCTTCTCCTAATAATTTTTATATATGAAGCCAGCGCCGACACACAAACTGCAACAGAACCAGAAGTGGTCAGAACTTCACAAGACTTCCACTACTGCTGTGATTATAAGCAGGCTAGAGGAAACTACGCAGCCAACAGCCCCTATCAGACCAACCTCAACACCCTTTTGTCCACTCTCACTTCCAATACAGATATTGACTACGGTTTCTACAATTTCACAAACGGCGAAAACCCCGACAAAGTGTACGCCATTGGGCTGTGCAGAGGAGATATTAATCCAGATGAATGCCGTAACTGCCTCAAACTTTCCAGAGCCAATCTCACAGAGCTCTGTCCAGTTCAGAAGGATGCAATTGGGTGGTACGAGGACGACAAATGCATGTTGCGCTACTCAGACTACAAAATATTTAACAAGGTGGAAGATGGACAAACGTATTATGCTGGCTCCGAGGAAATTGCAACGGACTTGGATCAGTTCACAAAAGATCTCAAAAACTTGATGAATACCTTAAAAGGCAAAGCTGCATCAGGTGACTCTCGTCTCAAGTATGATGTAGGAAGCATACCTGGTCCTGATAATAAGCACATATATGGTCTTGTTCAGTGCACACCGGACTTGTCAGGGTCAGAGTGTGATGATTGCTTGGGGCGGTCCATTCAAGTCATCCCAACAGATTGTTGTGAAAGCAGAACAGGTGGTAAGGTTGTTAGACCCAGTTGTAATTTGAGGTTCCGAACCTCAGGTCCGTTCAATGAAGCATTTGTTGAAGGTTGCAGCAATGCTAAAATCATTTCATTTAAGTGCCACTTACTTATTAGCGTTGTCGTGGTAATAGTAGTACCAGTTGTTGTGGTCGTCGCTGCTGTGGTGCTCATTTATATCTACATCTATCCTAAAAAAGATCCTATTCCAGAAAAAGAAGAAATCGAAATTGACAATTCTGAGTCATTGCAATTCAGCATTAACGACATACGAAATGCTACAGATGACTTCTCCGATTACAATAAAATTGGAGAAGGTGGATTTGGTGCTGTTTACAAGGGAAGGCTTTCCAATGGACAAGAGATTGCCATCAAAAGGTTGTCTGGAAAAACTAGCCAAGGAGATAGAGAATTCGAGAACGAAGTTCGTTTACTATCTAAACTTCAGCACCGAAATTTAGTTAGGCTACTTGGTTTCTGTGTGGAAGGAAAAGAAAGACTACTTGTCTATGAATTTGTTATAAATAAAAGCCTTGATTACTTCATATTTGATCAAACTAAGAGAGCACAATTAGATTGGGAAAAACGCTACAAAATCATTACTGGTATTGCTCGAGGCATTCTCTACCTCCATCAGGATTCTCGATTGCGCATTATCCATCGTGATCTCAAACCAAGTAACATCCTCTTAGATGAAGAGATGAATCCTAAACTATCAGATTTTGGTTTGGCAAGACTGTTTGATGTGGACCAAACTCTTGGTCATACAAATAGACCTTTTGGAACCAGTGGATACATGGCACCTGAGTATGTAAATGGAAAGTTTTCAGAGAAGTCAGATGTTTTTAGTTTTGGCGTATTGGTTCTTGAGGTTATAAGCGGCCAGAAAAATAGTGGCATTTGGAACGGAGAGAAGAAGGAGGATCTACTAAGTATTGCATGGCGAAACTGGAGGGAAGGAACAGCTGCAAATATTGTAGATGCCACCTTAATCAATGGTTCACAAAATGAAATAGTGAGATGCATCCACATTGGGTTACTCTGTGTTCAAGAAAATGTAGCTGCCAGACCCACCATGGCTTTCGTTGTAACCGTGTTTAATAGCCATTCTCAAACTCTCCCAGTACCTTTAGAACCTGCATATTATGATGATAGTGCACAATTACCAGAGTTTAATTCCGGGGCAACAATCGAGTATACAACTAGATCAACATCGGGGGAAGAAGGCCAATGA 1956 0.4141 MGCAIINLLLIIFIYEASADTQTATEPEVVRTSQDFHYCCDYKQARGNYAANSPYQTNLNTLLSTLTSNTDIDYGFYNFTNGENPDKVYAIGLCRGDINPDECRNCLKLSRANLTELCPVQKDAIGWYEDDKCMLRYSDYKIFNKVEDGQTYYAGSEEIATDLDQFTKDLKNLMNTLKGKAASGDSRLKYDVGSIPGPDNKHIYGLVQCTPDLSGSECDDCLGRSIQVIPTDCCESRTGGKVVRPSCNLRFRTSGPFNEAFVEGCSNAKIISFKCHLLISVVVVIVVPVVVVVAAVVLIYIYIYPKKDPIPEKEEIEIDNSESLQFSINDIRNATDDFSDYNKIGEGGFGAVYKGRLSNGQEIAIKRLSGKTSQGDREFENEVRLLSKLQHRNLVRLLGFCVEGKERLLVYEFVINKSLDYFIFDQTKRAQLDWEKRYKIITGIARGILYLHQDSRLRIIHRDLKPSNILLDEEMNPKLSDFGLARLFDVDQTLGHTNRPFGTSGYMAPEYVNGKFSEKSDVFSFGVLVLEVISGQKNSGIWNGEKKEDLLSIAWRNWREGTAANIVDATLINGSQNEIVRCIHIGLLCVQENVAARPTMAFVVTVFNSHSQTLPVPLEPAYYDDSAQLPEFNSGATIEYTTRSTSGEEGQ* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2265 651 SUPERFAMILY Protein kinase-like (PK-like) 318 605 IPR011009 -
Gso10g2265 651 ProSiteProfiles Gnk2-homologous domain profile. 148 256 IPR002902 -
Gso10g2265 651 Gene3D Phosphorylase Kinase; domain 1 305 413 - -
Gso10g2265 651 Gene3D - 36 141 IPR038408 -
Gso10g2265 651 Gene3D - 150 255 IPR038408 -
Gso10g2265 651 ProSiteProfiles Gnk2-homologous domain profile. 37 142 IPR002902 -
Gso10g2265 651 Pfam Salt stress response/antifungal 40 140 IPR002902 -
Gso10g2265 651 Pfam Salt stress response/antifungal 161 253 IPR002902 -
Gso10g2265 651 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 638 - -
Gso10g2265 651 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 7 638 - -
Gso10g2265 651 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Gso10g2265 651 ProSiteProfiles Protein kinase domain profile. 338 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2265 651 CDD STKc_IRAK 344 608 - -
Gso10g2265 651 Pfam Protein kinase domain 339 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2265 651 Gene3D Transferase(Phosphotransferase) domain 1 415 615 - -
Gso10g2265 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Gso10g2265 651 SMART serkin_6 338 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2265 Gso-Chr10 49731321 49735339 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2265 46 637 Receptor kinase-like Gene Family AT4G21410 47.709 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso10g2265 Pkinase 5.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2265 - - gmx:100305408 1245.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1101 20 40788760 40792418 Gso10g2265 10 49731321 49735339 GST