Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2262 ATGTCTGTTATTTCCTTTATTTGTTGTCTCCTTTTCATAATTACTATATCTCAAGCCAGCGCCCAGCCAAGTTTCGTAAATCACTTTTGTCTCAGTGATAAAGGCAGATTCACAGCCAACAGCACTTATCACACAAACCTCAACACCCTTTTATCCAATCTCACTTCCAACACAGGAATCGACTATGGTTTCTACAATCTCTCTTACGGCGAAAACATGGACAAAGTAAACGCCATTGGGCTGTGCAGAGGAGATGTTAAACCAGACGAATGCAGCAGCTGCCTAAACAATTCAACGGTCCTTCTCACCCAGCTTTGTCCAAACCAGAAAGAGGCAATTGGGTGGTATGACAAGTGCATGTTGCGCTACTCAAACCGCTCAATATATGGCGTCATGGAAACTTCACCTTTGTTTTATTTGTCGGAAATAACCAATGCAACGGACGTGGACCAGTTCAATCAAGTGTTGGGGAACTTGATGAGTAATCTAACGGGCATAGCTGCATCAGGTGACTCTCGACGCAAGTACGCCGCCGCCAGCGCAACCGCCACAAATATTCAAGCAATATATGGTCTGGTGCAGTGCACTCCAGACTTGTCTCAGCCAGAGTGCAAACACTGCTTGATTGGGGCTATCTCAGAAATCCCAAGATGTTGTAACGGCAAGATAGGTGGTAGAGTTCTTAGACCCAGTTGTAATATCAGATACGAAAACTACCCCTTCTATGATGAACCTACGGCATATGCACCAGCTCCATCTCCATCTCTAGAGAACATGGTCCTTAAAATTATCCTCTTATTCTTAATTCTTCAAATGTCTCACGAGCAGAGGAATCTTGTTTTTGCAGAAAGTAGCAACACAACATTGATTGTCATTGCTGTAATTGTGCCTACTGTTGTTGTTTTGCTCATTTGTCTCTGCCTATATTTAAGGAGGAGTAAGGCAAGGAAAAATCTTACAGAAGATGCAATTGAAGATGATGATGAAATTAAAATTGCTGAGTCATTACAATTCAACTTGGACACAATACGAGTTGCTACAGAAGACTTCTCTGAATCTAATAAACTAGGACAAGGTGGATTTGGAGCTGTTTATTGGGGTAAGCTCTCTAATGGACAGATGATTGCAGTCAAAAGGTTGTCAAGAGATTCTGGGCAGGGGGATACGGAATTTAAAAATGAAGTGCTTTTAGTGGCCAAGCTTCAGCACCGAAATTTAGTTAGGCTTCTTGGTTTCTGCTTGGAAGGAAGAGAAAGGCTACTCGTCTATGAATATGTTCATAATAAAAGCCTTGATTATTTCATATTCGATTCAACCATGAAAGCACAACTGGATTGGGAAAGACGCTACAAAATCATTAGAGGTATTGCTCGAGGCCTTCTCTACCTTCACGAAGATTCTCGACTGCGTATTATCCATCGTGATCTCAAAGCAAGCAACATTCTCTTAGATGAAGAGATGAATCCTAAGATAGCAGATTTTGGCATGGCAAGACTGGTATTAGTGGATCAAACTCAAGCAAATACAAGTAGAATTGTGGGAACCTATGGATATATGGCGCCAGAGTATGCAATGCATGGACAATTTTCAGTGAAATCAGATGTCTTCAGTTTTGGTGTATTAGTTCTTGAGATTGTAAGTGGCCAGAAAAACAGTGGCATTAGTAATGGGGAGAATATGGAGGATCTACTAAGCTTCGCATGGAGAAACTGGAAGGAGGGGACAGCTATAAATATTGTAGATCCATCACTAAACAACAATTCACGAAATGAAATGATGAGAAGCATCCATATTGGTTTACTTTGTGTTCAAGAAAATTTAGCTGACAGACCAACCATGGCTAACATTATACTGATGCTTAATAGCTATTCTCTCAGTCTCCCAATTCCGGCCGAACCTGCATTTTATATGAACAGTAGAACTCAAAGCCGTCCAGACATGCAATCATGGGAGTATAATTCAAGGGAAACAGGAACAAGTGAACCGATACTTAAATCAGCTCAAGAATCAGAAAATGAAGCTTCAATTACTGAGCTATACCCTCGCTAG 2049 0.4114 MSVISFICCLLFIITISQASAQPSFVNHFCLSDKGRFTANSTYHTNLNTLLSNLTSNTGIDYGFYNLSYGENMDKVNAIGLCRGDVKPDECSSCLNNSTVLLTQLCPNQKEAIGWYDKCMLRYSNRSIYGVMETSPLFYLSEITNATDVDQFNQVLGNLMSNLTGIAASGDSRRKYAAASATATNIQAIYGLVQCTPDLSQPECKHCLIGAISEIPRCCNGKIGGRVLRPSCNIRYENYPFYDEPTAYAPAPSPSLENMVLKIILLFLILQMSHEQRNLVFAESSNTTLIVIAVIVPTVVVLLICLCLYLRRSKARKNLTEDAIEDDDEIKIAESLQFNLDTIRVATEDFSESNKLGQGGFGAVYWGKLSNGQMIAVKRLSRDSGQGDTEFKNEVLLVAKLQHRNLVRLLGFCLEGRERLLVYEYVHNKSLDYFIFDSTMKAQLDWERRYKIIRGIARGLLYLHEDSRLRIIHRDLKASNILLDEEMNPKIADFGMARLVLVDQTQANTSRIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLVLEIVSGQKNSGISNGENMEDLLSFAWRNWKEGTAINIVDPSLNNNSRNEMMRSIHIGLLCVQENLADRPTMANIILMLNSYSLSLPIPAEPAFYMNSRTQSRPDMQSWEYNSRETGTSEPILKSAQESENEASITELYPR* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2262 682 SUPERFAMILY Protein kinase-like (PK-like) 336 652 IPR011009 -
Gso10g2262 682 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 656 - -
Gso10g2262 682 Pfam Protein tyrosine and serine/threonine kinase 353 618 IPR001245 GO:0004672|GO:0006468
Gso10g2262 682 Gene3D Transferase(Phosphotransferase) domain 1 426 627 - -
Gso10g2262 682 Pfam Salt stress response/antifungal 145 239 IPR002902 -
Gso10g2262 682 Pfam Salt stress response/antifungal 30 125 IPR002902 -
Gso10g2262 682 ProSiteProfiles Gnk2-homologous domain profile. 25 128 IPR002902 -
Gso10g2262 682 SMART serkin_6 350 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2262 682 ProSiteProfiles Protein kinase domain profile. 350 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2262 682 Gene3D Phosphorylase Kinase; domain 1 311 425 - -
Gso10g2262 682 ProSiteProfiles Gnk2-homologous domain profile. 134 241 IPR002902 -
Gso10g2262 682 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Gso10g2262 682 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 3 656 - -
Gso10g2262 682 MobiDBLite consensus disorder prediction 646 675 - -
Gso10g2262 682 Gene3D - 136 241 IPR038408 -
Gso10g2262 682 Gene3D - 22 127 IPR038408 -
Gso10g2262 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Gso10g2262 682 CDD STKc_IRAK 356 621 - -
Gso10g2262 682 MobiDBLite consensus disorder prediction 646 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2262 Gso-Chr10 49680087 49689851 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2262 1 682 Receptor kinase-like Gene Family AT4G21410 49.155 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso10g2262 PK_Tyr_Ser-Thr 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2262 - - gmx:100791056 1289.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1106 20 40865131 40868795 Gso10g2262 10 49680087 49689851 GST