Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2261 ATGGTCACTCAAAGAGCATCATTTTACCTTTGTCTCCTTGTTATTCTGATAACTCAAGCTACTGCGGAGCCAGACGACCAATACCCAGTCTGCTTCAGCAGTGGTGGAGACTATGCCCCTAATAGCACCTATCACACCAACCTCAATAGTGTTCTTTCAAGGCTCACTTCCAACACGCAAATCGACTATGGCTTCTACAATTCCTCCTACGGCCAAGACTCTGATAGAGTCTACGCAACAGGCCTTTGCAGAGGAGATGTTTCCCGACATACTTGCCTTACTTGCCTCAACAATTCTAGCTTTTTTCTCCTAAAGAACTGTCCACATCAGAAGGAGGCTGTGGGATTGGGAGGATATGATAAATGCATTTTACACTATGCAGATCACTCAATGTTCAGTTACCAAGAGTCTTCTTTCCGGTTCTATTTTTGGGAGGAAACTAATGTAACGAATTGGGATCAGTACAGTTATGTGCTCAATCAGTTGCTGTCAAGACTAAGAGTGAAAGCTGCAACATCTAACTCCAATCTCCACCGTAAATTTGCTGCTGGAAATGCAACAGTTCCGACTCCGAGTTCCCAAACTATATATGCTGTTGTTCAGTGCTATCCTGATCTGACAGCCGCAGAATGCAACGACTGCTTAAGTGGCGCTTTCTCAGAAATACCGAAATATTGTAATAACAGGTCAGGTTGTGGAGGTATTAAATTAAGCTGTAACTTTAGATATGAGAACTCCAGCTTCTATGAGCCTACGCCTGATACGGTAACACTACAATTTTCACCACAAGGATCTCCATCTCCTACACCATCCATCACTTCAAATTCCTCAGAGAGTACTTATCATGGAAAAAGCAGCAAATCTCAAGCTGTCAACGCCAAATACGTTGTCGCACCTATTCTATTCTTTGTTGGGTTGCTGATCTTGATTTGCATCTATTTAAGAGTGAGGAAGTCAACAAAGCATTTTGAGAGTGAACCCATGGTTGATGACGAAATTAAACTAGTCGTGTCATCACAGTTTGACTTTGACACCATAAGAGTCGCTACGAACAACTTCTCTGATGCAAACAAGCTTGGACAAGGTGGATTTGGACCTGTTTACAAGGGGACACTCTTCAATAAACAAGAAGTAGCAATCAAAAGGTTATCTAGCAACTCTTGCCAAGGAAATATTGAATTCAAGAATGAAGTGATACTAATGTCCAGGCTTCAGCACCGAAATTTAGTTAGGCTCCTTGGTTTTTGTTATGAAAGCGAAGAACGGCTCCTTGTCTATGAGTTTCTTCCCAATAAAAGTCTTGACAAGATCATATTTGATCCCATCGAGCGTGCACATTTGGATTGGAAAAAACGCCACAAAATAATTGAAGGCATTGCACTTGGCCTTCTTTATCTTCATGAGGATTCTCAGCAAAGGATTATTCATCGTGATCTCAAATTGAGTAATATTCTTTTAGATGCCGATATGAATCCTAAGATTTCAGATTTTGGCTTTGCAAGGCTGTTTAATGCGGATCAAACTCTGCTTAATGCAAGTAAAATTGCAGGAACTTATGGATACATGGCACCTGAGTATGCAAGGCATGGAAAACTCTCAACGAAGTTAGATGTCTTTAGTTTCGGTGTAGTAATACTAGAGATTGTAAGTGGCAAAAAGAATAGTGGATTTCGTATTGGAGAGAGTGTGGAGCATTTATTAAGCTTTGCTTGGAAAAACTGGACGAAAGGGACAGCAGATAAAATTATAGATCCTGCCTTAAATAATGCTTTGAGAGATGAAATACTGAGATGCATTCACATTGGGCTACTTTGTGTTCAAGAAAAGGTTGCTGATAGACCAACAATGGCTTCAGTTATACTTATGCTTGATAGCCACTCTTTTGCTCTACCAGTTCCATTGCAACCGGCCTATTTTATGAAAAATAGTTGTTTATCAGTCATCCAGTTTTCGGGGTGCAGTTCCGTGGAAACAGGATCAAATGAACAGAAAAGTGACTCTGCTGATGTATCAGCAAATGAGGCCTCAATTAGTAGTCTATATCCTCGTTAG 2052 0.4069 MVTQRASFYLCLLVILITQATAEPDDQYPVCFSSGGDYAPNSTYHTNLNSVLSRLTSNTQIDYGFYNSSYGQDSDRVYATGLCRGDVSRHTCLTCLNNSSFFLLKNCPHQKEAVGLGGYDKCILHYADHSMFSYQESSFRFYFWEETNVTNWDQYSYVLNQLLSRLRVKAATSNSNLHRKFAAGNATVPTPSSQTIYAVVQCYPDLTAAECNDCLSGAFSEIPKYCNNRSGCGGIKLSCNFRYENSSFYEPTPDTVTLQFSPQGSPSPTPSITSNSSESTYHGKSSKSQAVNAKYVVAPILFFVGLLILICIYLRVRKSTKHFESEPMVDDEIKLVVSSQFDFDTIRVATNNFSDANKLGQGGFGPVYKGTLFNKQEVAIKRLSSNSCQGNIEFKNEVILMSRLQHRNLVRLLGFCYESEERLLVYEFLPNKSLDKIIFDPIERAHLDWKKRHKIIEGIALGLLYLHEDSQQRIIHRDLKLSNILLDADMNPKISDFGFARLFNADQTLLNASKIAGTYGYMAPEYARHGKLSTKLDVFSFGVVILEIVSGKKNSGFRIGESVEHLLSFAWKNWTKGTADKIIDPALNNALRDEILRCIHIGLLCVQEKVADRPTMASVILMLDSHSFALPVPLQPAYFMKNSCLSVIQFSGCSSVETGSNEQKSDSADVSANEASISSLYPR* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2261 683 ProSiteProfiles Gnk2-homologous domain profile. 137 248 IPR002902 -
Gso10g2261 683 SUPERFAMILY Protein kinase-like (PK-like) 340 648 IPR011009 -
Gso10g2261 683 ProSiteProfiles Gnk2-homologous domain profile. 26 131 IPR002902 -
Gso10g2261 683 Gene3D - 136 248 IPR038408 -
Gso10g2261 683 Gene3D - 27 131 IPR038408 -
Gso10g2261 683 Gene3D Phosphorylase Kinase; domain 1 315 428 - -
Gso10g2261 683 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 4 663 - -
Gso10g2261 683 Pfam Salt stress response/antifungal 148 245 IPR002902 -
Gso10g2261 683 Pfam Salt stress response/antifungal 31 128 IPR002902 -
Gso10g2261 683 MobiDBLite consensus disorder prediction 659 683 - -
Gso10g2261 683 ProSiteProfiles Protein kinase domain profile. 353 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2261 683 MobiDBLite consensus disorder prediction 259 283 - -
Gso10g2261 683 Pfam Protein kinase domain 354 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2261 683 CDD STKc_IRAK 359 624 - -
Gso10g2261 683 Gene3D Transferase(Phosphotransferase) domain 1 429 629 - -
Gso10g2261 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Gso10g2261 683 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 663 - -
Gso10g2261 683 SMART serkin_6 353 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2261 Gso-Chr10 49675407 49678900 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2261 8 683 Receptor kinase-like Gene Family AT4G21410 44.236 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso10g2261 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2261 - - gmx:100790532 1321.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1108 20 40885782 40896145 Gso10g2261 10 49675407 49678900 GST