Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2255 ATGTGCATATTCGAATCCTCTTCAACCCACTTGCTACTTCTCTCTCTCTTTGCCTTGCTAAACTCTGCAAGTGAAGCAACTCCTATTTATACCGCACATGCCTGCACAGATGGATCCTATTACTTACCCAACACACCATTCCAAACCAACTTGAACCTCCTCCTCTCATCCCTCGTCTCCAGCGCCACCCTCCACGACGGATTCCACCGCACCACCATCGACGATGTCAAGGGACTCTTCCTCTGCCGCGGCGACGCCACCCCCTCCGCCTGTCACGACTGCGTCACCGCCGCGGCCAAAAATATCACAGACCTCTGCCCCAACCAAACAGAGTCCATAATCTGGTACGACCACTGTATGCTGCGTTACTCCAACAGCTCCATTCTCAACAACATAGTTCCAAGTTTTGGCCTCGGTAACGAACCGAGCGTCCCTGACTCGGACCACACACGGTTCAACGATGTTCTTGCGCCCACGTTGAACGATGCGGCACGGGAAGCCGTGAATTCGAGTAAGAAGTTTGCTACAAAAGAAGCGAATTTCACGAGCTCCATGAAGCTCTACACACTGGCGCAGTGCACGCCCGATTTGTCCACTTCTGAGTGCAACACGTGCTTCGCAAGCTCCATCGGTGCCTTTCCGAATTGCTGTGACGGCAAACGAGGTGCACGGGTCCTGCTTCCGGGCTGTAGTGTCAGATATGAATTGTTTCCATTTTACAACGTTTCCACCGCTTCCCGCCTTCCCTCTCCGTCTTCAGGGAAAAGCAGTATCTCTATAATTTTGGCGATCGTTGTCCCAATTACAGTTGCAATTCTACTTTTCATTGTTGGCGTCTACTTCCTTCGTAAGAGGGCAAGCAAGAAGAATAATACTTTCGTCCAGGATTCAATTGCAGATGATCTTACAGATGTCGGTGATGTGGAGTCCTTGCAATTCGACTTGCCTACAGTTGAAGCTGCCACAAACAGATTCTCGGATGAGAACAAGATTGGCCAAGGTGGATTTGGGGTGGTTTATAAGGGTGTCCTCCCTAACGGACAGGAGATAGCTGTGAAGAGGTTGTCAGTAACCTCCTTGCAGGGTGCTGTAGAGTTCAGGAATGAAGCTGCTCTTGTGGCCAAGCTTCAACATAGAAATTTAGTGAGACTATTGGGATTTTGCTTGGAGGGACAAGAGAAGATCCTTATCTATGAATACATACCAAACAAAAGTCTTGATTACTTTTTATTTGACCCTGCAAAGCAAAAAGAGTTAGATTGGTCAAGACGCTACAAAATTATAGTTGGTATTGCTCGAGGAATTCAGTATTTACATGAAGATTCCCAACTTAGAATTATACACCGGGATCTCAAAGCTAGTAATGTTCTATTAGATGAAAATATGAACCCAAAGATTTCAGATTTTGGTATGGCAAAAATTTTCCAGGCAGATCAGACTCAAGTAAATACAGGAAGGATAGTTGGGACTTATGGTTACATGTCTCCAGAATATGCAATGCGTGGACAGTTCTCTGTGAAATCAGATGTGTTCAGCTTTGGTGTCTTAGTTTTGGAGATTGTGAGTGGCAAGAAGAACACTGACTTTTATCAATCGAATCATGCTGATGACCTTTTAAGCCATGCGTGGAAGAATTGGACACTGCAGACACCTCTGGAGTTGCTGGATCCAACACTGAGAGGTTCTTATTCAAGAAATGAAGTCAACAGATGCATCCATATTGGTTTATTGTGTGTTCAAGAAAATCCATCTGATAGGCCTTCGATGGCCACTATTGCACTTATGCTGAACAGTTATTCAGTTACCATGTCAATGCCACAACAACCAGCATCTTTTCTGCGTGGAAGAGGTCCTAACAGGTTAAACCAAGGGATGGACTCTGATCAGTCTACCACCGATCAGTCTACGACTTGTTCAATTCCATGGTCTGTGAATGAAGTATCCATTACTGATGTATACCCTCGCTAA 1968 0.4583 MCIFESSSTHLLLLSLFALLNSASEATPIYTAHACTDGSYYLPNTPFQTNLNLLLSSLVSSATLHDGFHRTTIDDVKGLFLCRGDATPSACHDCVTAAAKNITDLCPNQTESIIWYDHCMLRYSNSSILNNIVPSFGLGNEPSVPDSDHTRFNDVLAPTLNDAAREAVNSSKKFATKEANFTSSMKLYTLAQCTPDLSTSECNTCFASSIGAFPNCCDGKRGARVLLPGCSVRYELFPFYNVSTASRLPSPSSGKSSISIILAIVVPITVAILLFIVGVYFLRKRASKKNNTFVQDSIADDLTDVGDVESLQFDLPTVEAATNRFSDENKIGQGGFGVVYKGVLPNGQEIAVKRLSVTSLQGAVEFRNEAALVAKLQHRNLVRLLGFCLEGQEKILIYEYIPNKSLDYFLFDPAKQKELDWSRRYKIIVGIARGIQYLHEDSQLRIIHRDLKASNVLLDENMNPKISDFGMAKIFQADQTQVNTGRIVGTYGYMSPEYAMRGQFSVKSDVFSFGVLVLEIVSGKKNTDFYQSNHADDLLSHAWKNWTLQTPLELLDPTLRGSYSRNEVNRCIHIGLLCVQENPSDRPSMATIALMLNSYSVTMSMPQQPASFLRGRGPNRLNQGMDSDQSTTDQSTTCSIPWSVNEVSITDVYPR* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2255 655 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 654 - -
Gso10g2255 655 ProSiteProfiles Gnk2-homologous domain profile. 132 239 IPR002902 -
Gso10g2255 655 Gene3D Phosphorylase Kinase; domain 1 286 400 - -
Gso10g2255 655 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 5 654 - -
Gso10g2255 655 Gene3D Transferase(Phosphotransferase) domain 1 401 610 - -
Gso10g2255 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Gso10g2255 655 Pfam Salt stress response/antifungal 35 125 IPR002902 -
Gso10g2255 655 Pfam Salt stress response/antifungal 148 235 IPR002902 -
Gso10g2255 655 MobiDBLite consensus disorder prediction 622 637 - -
Gso10g2255 655 CDD STKc_IRAK 331 597 - -
Gso10g2255 655 SUPERFAMILY Protein kinase-like (PK-like) 311 618 IPR011009 -
Gso10g2255 655 ProSiteProfiles Gnk2-homologous domain profile. 29 128 IPR002902 -
Gso10g2255 655 Gene3D - 28 127 IPR038408 -
Gso10g2255 655 Gene3D - 140 239 IPR038408 -
Gso10g2255 655 ProSiteProfiles Protein kinase domain profile. 325 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2255 655 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Gso10g2255 655 SMART serkin_6 325 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2255 655 MobiDBLite consensus disorder prediction 614 637 - -
Gso10g2255 655 Pfam Protein tyrosine and serine/threonine kinase 328 593 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2255 Gso-Chr10 49644011 49647596 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2255 7 655 Receptor kinase-like Gene Family AT4G05200 49.926 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso10g2255 PK_Tyr_Ser-Thr 3.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2255 - - gmx:100788416 1255.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1113 20 40936326 40940217 Gso10g2255 10 49644011 49647596 GST