Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2253 ATGGGTTCTTTTCATTTGTTCCTTCTGCTCCCAACTTTCTTTTCCCTCTTTCTTCACACCTCTCCCTCCCCTATCATCCAAGCAGCTATCGATCAAGGTACCAAAGCCTACTATAACTGCACAAGAAACAGCACTTTTGCTTCCTATAGCGCTTATCGTTCTAATGTCAAAATACTCCTAGATTTTCTCTCCTCCAATGGCACCAACAATGCCAAATTCTACAACACTACAGTTTATAGTGAAGACACTGCAGACCCTGTTCATGGTAGCTTCCTTTGTACAAGAGACACCATTCCAAAACAGTGTCAAGAATGTGTGACACAAGCTGCCAAACTCATATCATCGCTTTGCAACAATGCTACAGAAGCTATAGTATGGTACCAAGTATGCTATGTGCGCTACTCCGATCGTCGTTTCTTCTCCACGGTGGAGGAGAGTCCTAAACTCTCCTTTATGAATGATCAGGATTATGTGGGTAACGTTGGGCGCTTCAACAACATTGTGTGGGATATGATGAATGATTTGAGAAGTGAGGCAGCAAGTGCTTCTAACAAATCGGCTGATAAGTCCGTGAACATCACAGATAATCAAAAGGCATATGGCTACGTTTGGTGCCTCCCATACCTGTCCAGTGAGAACTGTAGCTGGTGTCTTAGTGATGCCATAGCAGAAATTCCAACCGGTTGCTGCAGAGGAAAATCTGGGGGAACAATAATATATCCCAGTTGTGGTGTTAGATACGAATTATATCAATTCCATAAGGCACATATCAGGGGTGGTTCGGTGTCGCCGCCGCCACTTCCCAATAGTTCTTCTTCCCCATTTGCTTCATCAGGGAAAAGAAAAAAGAAGACACTAACAATAATTGTGATTGTAGTTCCAATTGTTGTTTCACTGGTGCTTCTAGCGTTGAGATGCTGCTGCTTTTTACGTAGAAAAGAAACAAAGAATCAACATGATATTCTCAAAGAAAGCTTTGGGAATGACAGTACCACTCTGGAAACTTTGCGATTTGAATTAGCCAAAATTGAAGCTGCAACAAATAGATTTGCTAAAGAAAACATGATAGGCAAAGGTGGATTTGGCGAGGTTTATAGGGGTATTCTTTCAGATGGAAAAGAAATAGCAGTGAAGAGGCTCACTGGAAGCTCCAGGCAAGGAGCAGTGGAGTTTAGAAATGAGGTTCAGGTTATAGCAAAACTTCAACACAGAAATTTAGTGAGATTACAAGGATTTTGCTTAGAAGATGACGAAAAGATACTTATTTATGAGTATGTGCCAAACAAGAGCCTTGATTATTTTTTATTGGATACCAAGAAGCGAAGACTACTGTCTTGGTCTGATCGTCAAAAGATCATTATAGGAATTGCTCGGGGAATTCTATATCTACATGAGGATTCTTGTCTCAAAATAATACATCGTGATTTAAAACCTAGTAATGTTTTACTAGATAGTAATATGAATCCAAAAATCTCAGATTTTGGCATGGCGAGAATTGTTGTTGCAGATCAAATTGAAGAAAGTACAGGCAGAATTGTAGGGACATATGGTTATATGTCTCCAGAATATGCAATGCATGGACAATTTTCTGTGAAATCTGATGTGTTTAGTTTTGGAGTCATGGTTCTAGAGATTATTAATGGAAAAAGGAAAGGTTGTTCTTCTGTATCGGATGGCATTGATGACATCCGGAGACATGCTTGGACGAAATGGACAGAGCAAACGCCATTGGAACTATTGGATTCTAACATAGGAGGACCTTATTCCCCAGAAGAAGTCATCAAATGCACACACATTGGTTTGTTATGCGTTCAAGAAGATCCAAATGATAGGCCTACAATGGCAACAGTTGTGTTTTACCTCAACAGCCCTTCAATCAACTTGCCCCCTCCTCATGAACCAGGATATTTTAAGCGTGATAGAATAGAAGGCAACAAGACAATCAACAAAGAATTGGATAATATCAGTGATTCCATCAACGGAATTACTTTAACTAATTTGTTTCCTCGTATTCAAGATTTTGCTTTGTTGACTAATGCTCACAAACCTCAATCCCATTCATACACTGCGCCGTCTCTGATTCCGTCTCTGATTACTCCCCGTTTACGCACATTTGCATGCCCATCACTCATTTCTCCGTCTCAGTGCAGAAAATTTTTCAGCATCATGATTATCAGGTCCAAACTTAGTCTAACACTGTTCCTACTTTGCACCCTTTCACTCACCGTTACAGAAACCTCTGCATCAGTGTTCAACAACGTTAGCTGCTCGAGCAACAAGACTTTCACTCCGAACAGCACCTTCAACACCAACCTCAACACCCTCCTCTCTTACCTTTCCTCCAACGTAACCAACAACGTTAGATTCTTCAACGCCACCGCAGGTAAAGATTCGAACGCCGTCTATGGCCTCTACATGTGCCGTGGAGACGTGCCGTTTGCTCTATGCAGAGAGTGTGTGGGTTTTGCAACACTAACCATAGCCTCCTCATGTCCCACATCGAAAGAGGCTGTGATTTGGTACAACGAGTGTTTATTGCGCTACTCTTATAGGCTCATCTTCTCTAAAATGGAAGAGAGGCCAAGGCACAAGATCAATATTCCATTGGGGGACCCTCTGGTTTTGCATAGTAATGGATTCTACACTGCGTTAGGATCCATTTTCGATGAACTACCACATAAAGCAGCACTGGCTCTTGCCGAGTCTAATAATGGATATGCGGTTAAGCAAGAAAATACTTCTGCGAGTGTGACACTGTATGGCCTCGCGCAGTGCACGCCGGACTTGGCTGCCGGAGACTGCATACGGTGTGTCACCGATGCGGCGGCGGAGTTTGTCAAGTCTTGCTGCGGAGGGAGCATAGGAGCGAGTGTTCTGTTTCCGAGTTGCATTGTAAGGTATGAGACGTATCCGTTTTATCAGCATTCGGGAATCTCCGCGCCAACAATGATTAAGCGTGGAGGAAATATTGGAACTGAAGTGATTGTGATCGTTGTTGTCTTGGTTGTCGTTTTGGTGATGCTTTTTGGCTTTGGCTATTGTTTCATCCGGATAAAAGCGAGAAAGAAACGGAAGGCCGGTGACAGAGAAAAATTTGGGCCAGAACACACTGTCTTGGAGTCTTTGGAATTTGATTTGGTTACAATTGAAGCAGCCACAAACAATTTTTCTGAAGACCGCAGGATTGGCAAAGGGGGTTACGGAGAAGTGTACAAGGGAATCCTTCCTAACCGAGAGGAAGTAGCTGTAAAGAGATTATCAACAAATTCTAAGCAAGGAGCGGAGGAATTCAAAAATGAAGTGTTGTTAATAGCAAAACTTCAACACAAAAATTTGGTGAGATTAGTAGGATTTTGCCAAGAAGACAGAGAAAAAATACTTATTTACGAATATGTGCCTAACAAGAGCCTTGACCACTTCTTATTTGATTCCCAAAAGCACAGACAATTAACTTGGTCGGAGCGGTTTAAAATCATAAAAGGAATTGCAAGAGGTATTCTTTATCTTCATGAAGATTCTCGTCTTAAGATTATACACCGTGATATCAAACCAAGCAATGTTCTATTGGACAATGGCATCAATCCAAAAATCTCTGATTTTGGAATGGCAAGGATGGTAGCTACAGACCAAATTCAAGGATGTACGAATAGAGTTGTGGGCACATATGGTTATATGTCTCCTGAATATGCAATGCATGGACAATTTTCTGAGAAGTCTGATGTATTCAGTTTTGGAGTTATGGTTCTTGAGATTATTAGTGGGAAGAAGAACTCTTGTTATTTTGAATCATGCCGTGTTGATGACCTCTTGAGTTATGCATGGAATAACTGGAGGGATGAATCATCATTTCAATTACTGGATCCAACTCTGCTAGAGTCTTATGTTCCAAACGAAGTTGAAAAGTGTATGCAGATTGGTTTATTGTGTGTACAAGAAAATCCAGATGATAGGCCTACAATGGGAACCATTGTTTCATATCTTAGCAACCCATCGCTTGAAATGCCATTCCCTCTAGAACCAGCATTTTTCATGCATGGCAGAATGAGAAGACATTCAGCTGAACATGAATCATCTTCAGGTTACTCCACCAATCGTTCTTCCTTGTCCTCTGTGAATAAGATGTCTACGACTGCTTTCTTCCCTCGATAG 4149 0.415 MGSFHLFLLLPTFFSLFLHTSPSPIIQAAIDQGTKAYYNCTRNSTFASYSAYRSNVKILLDFLSSNGTNNAKFYNTTVYSEDTADPVHGSFLCTRDTIPKQCQECVTQAAKLISSLCNNATEAIVWYQVCYVRYSDRRFFSTVEESPKLSFMNDQDYVGNVGRFNNIVWDMMNDLRSEAASASNKSADKSVNITDNQKAYGYVWCLPYLSSENCSWCLSDAIAEIPTGCCRGKSGGTIIYPSCGVRYELYQFHKAHIRGGSVSPPPLPNSSSSPFASSGKRKKKTLTIIVIVVPIVVSLVLLALRCCCFLRRKETKNQHDILKESFGNDSTTLETLRFELAKIEAATNRFAKENMIGKGGFGEVYRGILSDGKEIAVKRLTGSSRQGAVEFRNEVQVIAKLQHRNLVRLQGFCLEDDEKILIYEYVPNKSLDYFLLDTKKRRLLSWSDRQKIIIGIARGILYLHEDSCLKIIHRDLKPSNVLLDSNMNPKISDFGMARIVVADQIEESTGRIVGTYGYMSPEYAMHGQFSVKSDVFSFGVMVLEIINGKRKGCSSVSDGIDDIRRHAWTKWTEQTPLELLDSNIGGPYSPEEVIKCTHIGLLCVQEDPNDRPTMATVVFYLNSPSINLPPPHEPGYFKRDRIEGNKTINKELDNISDSINGITLTNLFPRIQDFALLTNAHKPQSHSYTAPSLIPSLITPRLRTFACPSLISPSQCRKFFSIMIIRSKLSLTLFLLCTLSLTVTETSASVFNNVSCSSNKTFTPNSTFNTNLNTLLSYLSSNVTNNVRFFNATAGKDSNAVYGLYMCRGDVPFALCRECVGFATLTIASSCPTSKEAVIWYNECLLRYSYRLIFSKMEERPRHKINIPLGDPLVLHSNGFYTALGSIFDELPHKAALALAESNNGYAVKQENTSASVTLYGLAQCTPDLAAGDCIRCVTDAAAEFVKSCCGGSIGASVLFPSCIVRYETYPFYQHSGISAPTMIKRGGNIGTEVIVIVVVLVVVLVMLFGFGYCFIRIKARKKRKAGDREKFGPEHTVLESLEFDLVTIEAATNNFSEDRRIGKGGYGEVYKGILPNREEVAVKRLSTNSKQGAEEFKNEVLLIAKLQHKNLVRLVGFCQEDREKILIYEYVPNKSLDHFLFDSQKHRQLTWSERFKIIKGIARGILYLHEDSRLKIIHRDIKPSNVLLDNGINPKISDFGMARMVATDQIQGCTNRVVGTYGYMSPEYAMHGQFSEKSDVFSFGVMVLEIISGKKNSCYFESCRVDDLLSYAWNNWRDESSFQLLDPTLLESYVPNEVEKCMQIGLLCVQENPDDRPTMGTIVSYLSNPSLEMPFPLEPAFFMHGRMRRHSAEHESSSGYSTNRSSLSSVNKMSTTAFFPR* 1383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2253 1382 ProSiteProfiles Gnk2-homologous domain profile. 145 252 IPR002902 -
Gso10g2253 1382 SMART serkin_6 350 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2253 1382 SMART serkin_6 1056 1327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2253 1382 ProSiteProfiles Protein kinase domain profile. 350 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2253 1382 ProSiteProfiles Gnk2-homologous domain profile. 862 972 IPR002902 -
Gso10g2253 1382 Pfam Salt stress response/antifungal 879 970 IPR002902 -
Gso10g2253 1382 Pfam Salt stress response/antifungal 40 136 IPR002902 -
Gso10g2253 1382 Pfam Salt stress response/antifungal 756 849 IPR002902 -
Gso10g2253 1382 Pfam Salt stress response/antifungal 160 250 IPR002902 -
Gso10g2253 1382 ProSiteProfiles Gnk2-homologous domain profile. 750 853 IPR002902 -
Gso10g2253 1382 CDD STKc_IRAK 356 622 - -
Gso10g2253 1382 SUPERFAMILY Protein kinase-like (PK-like) 333 634 IPR011009 -
Gso10g2253 1382 ProSiteProfiles Protein kinase domain profile. 1056 1332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2253 1382 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Gso10g2253 1382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1177 1189 IPR008271 GO:0004672|GO:0006468
Gso10g2253 1382 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 728 1382 - -
Gso10g2253 1382 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 670 - -
Gso10g2253 1382 ProSitePatterns Protein kinases ATP-binding region signature. 1062 1084 IPR017441 GO:0005524
Gso10g2253 1382 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Gso10g2253 1382 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 10 670 - -
Gso10g2253 1382 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 728 1382 - -
Gso10g2253 1382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Gso10g2253 1382 Gene3D Phosphorylase Kinase; domain 1 1017 1131 - -
Gso10g2253 1382 Gene3D Phosphorylase Kinase; domain 1 311 425 - -
Gso10g2253 1382 Gene3D Transferase(Phosphotransferase) domain 1 426 627 - -
Gso10g2253 1382 Gene3D Transferase(Phosphotransferase) domain 1 1132 1333 - -
Gso10g2253 1382 SUPERFAMILY Protein kinase-like (PK-like) 1040 1361 IPR011009 -
Gso10g2253 1382 CDD STKc_IRAK 1062 1327 - -
Gso10g2253 1382 Gene3D - 33 139 IPR038408 -
Gso10g2253 1382 Gene3D - 148 252 IPR038408 -
Gso10g2253 1382 Gene3D - 874 972 IPR038408 -
Gso10g2253 1382 Gene3D - 749 851 IPR038408 -
Gso10g2253 1382 Pfam Protein tyrosine and serine/threonine kinase 1059 1327 IPR001245 GO:0004672|GO:0006468
Gso10g2253 1382 Pfam Protein tyrosine and serine/threonine kinase 353 618 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2253 Gso-Chr10 49622388 49632549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2253 12 639 Receptor kinase-like Gene Family AT4G05200 44.757 5.39e-179 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso10g2253 PK_Tyr_Ser-Thr 2.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2253 - - gsj:114402116 1625.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1120 20 40988633 40992091 Gso10g2253 10 49622388 49632549 GST