Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2236 ATGCAAGACTTTTTGGGCTCCCTTCGCCGCTCCTTGGTTTTCCGACCCGGCGGTGACGATTCCCCTTTTGCCGGAATCGCCAACAAGCTCGGCTCCGCCATTCGCAAATCACGAACCGCACTCGAACCTCCTCCTCCGATACGGTGGCGCAAGGGCGAGTTGATGGGTTCGGGCGCCTTCGGTCACGTCTACATGGGAATGAACCTCGACTCCGGGGAGCTTATTGCCATCAAACAGGTTTTAATTGCACCTGGTAGCGCATTCAAGGAGAATACACAGGCTAATATTCAGGAGCTCGAAGAAGAAATCAAGCTTCTCAAGAATCTTAAGCATCCAAATATTGTTAGATACTTGGGAACCGCTAGAGAGGAGGATTCCTTAAATATTCTGCTGGAGTTTGTTCCTGGTGGATCTATCTCATCGCTCTTGGGGAAATTTGGATCCTTCCCTGAATCCGTTATAAAAATGTATACAAAACAGCTTTTACTGGGCCTTGAATATCTTCACAGTAACGGGATTATTCACAGGGATATTAAGGGTGCCAACATTCTAGTTGATAACAAAGGGTGCATTAAACTCGCTGACTTTGGTGCATCCAAGAAAGTTGTTGAACTGGCTACCATCAACGGTGCAAAGTCAATGAAGGGTACACCACATTGGATGTCTCCTGAAGTTATTTTACAGACAGGACATACAATCTCTACTGATATATGGAGTGTTGCATGCACTGTGATAGAGATGGCCACAGGAAAGCCTCCATGGAGTCAACAGTATCCCCAGGAGGTGTCAGCTATTTTCTATATTGGGACAACTAAATCTCATCCACCCATACCTGAACATCTGTCTGCTGAGGCAAAGGACTTTTTGCTGAAATGCTTCCACAAGGAACCAAATTTAAGGCCTTCTGCATCAGAATTGTTACAGCATTCGTTCATCACCTGTGACTATCATGGATCTCATTCAATATTACGCAGTTCAATCAGGGACTCTTGCAATAAGATGGCAACCTATGGAATGAACTCTAGAAACTTCTTGGATTCTGTCCAGGGATCAACTTGCACGGGCTTAAAGGATGTTTGTCAGATAGATAGCATACGGTTCTCAACTGTATATCATAAAGCGGATTCCTACCAGAGAGCAAGCAACAATGATGATGACATGTGTCAGATGGATGAAGATGATTTTTTCATTGATTCATCAGTAAAATCTAAATCTCTATTGGCTTCTGATGATATAAAGAGTTTCAATCCTATGTGCAAACCTTTGGATGGCCGGCCTTTCAATTTTGATGAAACCCAATATTTGGAGAAAAGAAGACCAAACTTGCCATTTTCAAGTGAGCCTCTAGGAACTGAAGATGATGATGAAGTTACTGAGTCTAAAATTAGAGCCTTCCTGGATGATAAGGCCCTTGAACTGAAGAAGCTCCAAACACCTCTTTATGAAGAATTCCGTAACATATCAAATGCAGCCATTGCTCCAGCTCCCATTGAAGTTGCAAAGATTAAAGTTATGTCGGATGTCTCAAATGTAACATCATCAATAGGCAGGTCTGCTAGTCAGGCTTGGAGACGATTCTCTATGGTTGGCAGTGCTAATGTTGCAAGCCCCGGGAGTCATACGAAATACCGATCAAATCTTAGTGGTGCTCACTGTCGACCTTTGCAGGAAATTCAGCCATCTGAGCTTAATGAATCAGAGGAGACTCTTCATGATGCTGAGCTGGAATCATCTAATGTAAGTTCAAGCTTCTCTGAGAGGCAAAGGAAATGGAAGGAAGAATTGGTTGAAGAGCTTGACTGGAAGCGAGAGATGATGCGACAGGCCGGAATTGGAGGGAAGATAACATCACCAAAGGGGGATGGCAAATTTTAA 1875 0.4379 MQDFLGSLRRSLVFRPGGDDSPFAGIANKLGSAIRKSRTALEPPPPIRWRKGELMGSGAFGHVYMGMNLDSGELIAIKQVLIAPGSAFKENTQANIQELEEEIKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIKMYTKQLLLGLEYLHSNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPHWMSPEVILQTGHTISTDIWSVACTVIEMATGKPPWSQQYPQEVSAIFYIGTTKSHPPIPEHLSAEAKDFLLKCFHKEPNLRPSASELLQHSFITCDYHGSHSILRSSIRDSCNKMATYGMNSRNFLDSVQGSTCTGLKDVCQIDSIRFSTVYHKADSYQRASNNDDDMCQMDEDDFFIDSSVKSKSLLASDDIKSFNPMCKPLDGRPFNFDETQYLEKRRPNLPFSSEPLGTEDDDEVTESKIRAFLDDKALELKKLQTPLYEEFRNISNAAIAPAPIEVAKIKVMSDVSNVTSSIGRSASQAWRRFSMVGSANVASPGSHTKYRSNLSGAHCRPLQEIQPSELNESEETLHDAELESSNVSSSFSERQRKWKEELVEELDWKREMMRQAGIGGKITSPKGDGKF* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2236 624 SMART serkin_6 49 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2236 624 SUPERFAMILY Protein kinase-like (PK-like) 48 313 IPR011009 -
Gso10g2236 624 Gene3D Transferase(Phosphotransferase) domain 1 48 343 - -
Gso10g2236 624 PANTHER MAP KINASE KINASE KINASE 33 521 - -
Gso10g2236 624 Pfam Protein kinase domain 50 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2236 624 MobiDBLite consensus disorder prediction 562 589 - -
Gso10g2236 624 CDD STKc_MAPKKK 48 312 - -
Gso10g2236 624 Coils Coil 89 109 - -
Gso10g2236 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Gso10g2236 624 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 33 521 - -
Gso10g2236 624 ProSiteProfiles Protein kinase domain profile. 49 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2236 Gso-Chr10 49468074 49476894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2236 1 614 MAP Kinase Kinase Kinase AT3G06030 54.780 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gso10g2236 Pkinase 4.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2236 - K20606 gmx:100786810 1219.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1142 20 41171469 41180170 Gso10g2236 10 49468074 49476894 GST