Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2193 ATGGGGAAGAAGAAGGATAAAATCGTTCTTCCACCGGAGCTTCCGCCGGAGATTCCTGACGACGAAGTTGAAGTTTCCGACGATGACCTCCAATTCGTCAAGGAGAACCGCGCCTATGCCTCCTTGCTTTCCACCTTGGACACCCATTCAATCACCAAGCATGTTTCACGGGTTGCTGATGCCAAAGATGATGCATTGGAGAAACTTTATGAGAAACGCATGCAAAAGAATGCTCTCAAGAAAGAAAAAGAAGAAACTGGTTTGCAGGTTGATCGTGTAGATGCTCTTCCAATCAAGACATTGGATGGAAAAATCCATTACCGGACAGCTACAAAGACAGTATCAGAAAATGATCCAAGTGAAGAGGGAACTGGAGAGGATGTCAATAAAGACAAAGGTATGGTCAAGCTAACTAAGGCTGAAAAGAGAGCCAAGCTTAAGAAAATGAGAAAAGAGGCGAAACAACAAGGGAAAGAGGTGGCTAAAGCAGAAGTGGAAGAGACACCACAAGCAGCAGTGCTGGCTGAGGTAAAGGAAGATCTTACAGTTGAGGAGGCATTTGAAAGTAAGAAGCATAAACTTGCAGAATTGGGGAATGCCTTGCTTACAGATCCAGAGTCCAATATTAAATTTCTGAAGGAGATGGTGCAGATATCTAAAGATAATGATGATACCATTGTTAAACTTGGACTTCTTTCCCTCTTGGCTGTTTTCAAAGATATTGTCCCTGGCTATCGGATCAGGCTTCCTACTGAAAAGGAACTAGAAATGAAGGTTTCAAAGACTGTTAGAAAGATGCGTTATTATGAGTCAACTCTTCTCTCTGCATACAAGGCATACTTGCAAAGGCTAGTAGTCTTAGAAAAGAAGCCTTTATTTCAGCATGTAGCAGTTCGTTGTATTTGTTCTTTGCTTGATGCAAATCCCCATTTCAACTTTCGCGAAAGTTTGTTGGATGCTACTGTCGGAAACATAAGCTCTGCTAATGAGGCTATAAGGAAACTTTGTTGTTCCACAATTAAGTCACTCTTTGAGAATGAGGGTAAACATGGGGGTGAAGTTACTGTGGAGGCTGTTCGATTGATTGCCAATCATGTTAAAGCTCATAATTGTCAAATGCACCCAGATTCTGTTGGTGTTTTCTTGTCTCTTTCATTTGATGAGGATCTTGTGATGGCTAAAAGGATAGAAGATGAACAGAAATTTAAAAACAACAAAAGTAAGAAAAGGAAAAACTTGGAGGCATCAAATCAGTTAGAGAATGAGAGAAAGAAAAGTAGAAAAGAAATGATCTCCAAGACAAGAGAGGAGGTTGAAGCTGATTACAAGGCTGCATCCTTAGCCCCGGATGTTATGGAGAAGAAACATATGCAAACTGAAACACTCTCTGCTGTCTTTGAGACATACTTTCGCATTTTGAAGCATACTATGCAGTCCATAAGGGCCAGGCCTGAAGCAAACACTGGGGCATTATCTTCTGCAGTGGAACTCCTCCCTTTGCTTGCTCCATGTCTGAAAGGACTGGCAAAATTTTCACATCTGATTGACCTTGATTTCATGGGTGATCTAATGAACCATCTGAGAGTACTTGCTTCTGGAAGTAGCAACTCAGGCAACACTTCTGACAAGTGTTCTAAATGTTTGACCGTATCGGAACGTCTCCAGTGTTGCATTGTTGCTTTTAAAGTGATGAGGAACAATCTTGATGCCTTGAATGTTGATTTACAGGACTTCTTTCTCCATCTTTACAATCTTGTACTTGAATACAGGCCAGGAAGAGATCAAGGAGAGGTGTTAGCAGAAGCTTTGAAGATAATGTTGTGTGATGATAAGCAACACGACATGCAGAAGACTGCTGCATTTATAAAACGATTAGCAACGCTTTCACTGTGTGTTGGATCAGCAGATTCCATGGCTGCCTTGGTCACAGTAAAGCATCTTCTTCAGAAGAATGTTAAGTGCAGAAATTTATTGGAAAATGACATTGGAGGGGGCTCTGTTTCGGGCACAATTCATAAATATCTACCATATTCCACAGATCCCAATTTAAGTGGTGCCCTTGCCTCAGTACTTTGGGAACTCAATCTTTTGTCTAGTCATTATCATCCAGCTATATCAACACTGGCCTCGGGCATTTCAAGCATGAGTACTGCACATAACCAGATCCTTTTATCCAAGTCCTCTCCTCAACAAGCTTATAAGGAAATGTCTCTGGACCAGGAATTATGTTTCACACAACAGAGTGACGGTATAAAATTAAATAACAAGAAGAGACGTGCAAATGGCCCTGCTATTTCACCTTCCATTGGTTCTACAACAGTTACGAGTTCATTTGATGACAATGAATTGCAAAGGCAACTTAGTTCCCATTTTATGGTTCTTCATGACATAAAGGAGAATGAAAGGTTGAGAAAGGAGTTGGATAGGACTGCTCTATCACTACAGCTATATGAACAATATAAGAAACAAAAGAAACGATCAAAACCAAGTAGATGA 2496 0.4083 MGKKKDKIVLPPELPPEIPDDEVEVSDDDLQFVKENRAYASLLSTLDTHSITKHVSRVADAKDDALEKLYEKRMQKNALKKEKEETGLQVDRVDALPIKTLDGKIHYRTATKTVSENDPSEEGTGEDVNKDKGMVKLTKAEKRAKLKKMRKEAKQQGKEVAKAEVEETPQAAVLAEVKEDLTVEEAFESKKHKLAELGNALLTDPESNIKFLKEMVQISKDNDDTIVKLGLLSLLAVFKDIVPGYRIRLPTEKELEMKVSKTVRKMRYYESTLLSAYKAYLQRLVVLEKKPLFQHVAVRCICSLLDANPHFNFRESLLDATVGNISSANEAIRKLCCSTIKSLFENEGKHGGEVTVEAVRLIANHVKAHNCQMHPDSVGVFLSLSFDEDLVMAKRIEDEQKFKNNKSKKRKNLEASNQLENERKKSRKEMISKTREEVEADYKAASLAPDVMEKKHMQTETLSAVFETYFRILKHTMQSIRARPEANTGALSSAVELLPLLAPCLKGLAKFSHLIDLDFMGDLMNHLRVLASGSSNSGNTSDKCSKCLTVSERLQCCIVAFKVMRNNLDALNVDLQDFFLHLYNLVLEYRPGRDQGEVLAEALKIMLCDDKQHDMQKTAAFIKRLATLSLCVGSADSMAALVTVKHLLQKNVKCRNLLENDIGGGSVSGTIHKYLPYSTDPNLSGALASVLWELNLLSSHYHPAISTLASGISSMSTAHNQILLSKSSPQQAYKEMSLDQELCFTQQSDGIKLNNKKRRANGPAISPSIGSTTVTSSFDDNELQRQLSSHFMVLHDIKENERLRKELDRTALSLQLYEQYKKQKKRSKPSR* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2193 831 Coils Coil 405 436 - -
Gso10g2193 831 Coils Coil 139 166 - -
Gso10g2193 831 Pfam CBF/Mak21 family 554 709 IPR005612 -
Gso10g2193 831 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 778 IPR016903 -
Gso10g2193 831 SUPERFAMILY ARM repeat 204 628 IPR016024 -
Gso10g2193 831 PIRSF Noc3 1 811 IPR016903 -
Gso10g2193 831 MobiDBLite consensus disorder prediction 110 131 - -
Gso10g2193 831 Coils Coil 66 86 - -
Gso10g2193 831 Pfam Nucleolar complex-associated protein 190 280 IPR011501 -
Gso10g2193 831 MobiDBLite consensus disorder prediction 401 432 - -
Gso10g2193 831 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2193 Gso-Chr10 48969505 48978029 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2193 1 807 Core DNA Replication Machinery Family AT1G79150 57.753 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2193 K14834 - gmx:100776136 1572.76