Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2187 ATGGGGAAGACAGGCAAATGGCTTAGAAACTTGTTGACAGGTAAGAAAGACAAGGAAAAAGAGAAGGGAAAATCTACAACCAACCTGAATTGTTCTTCAAATGGAACAGAAAACTCAACCACTCCAACTTGCACAACCCCAAAGGAGAAAAAGAGATGGAGTTTTAGAAGATCATCAGCCTCAGCCACTACTGCCACAACCACACCACCAACAACTTCCAAGGAATTGAATTTTGTAGAAACAAATGTGACTGTTTCACAGACGGTGCAAACTGACACTGATATTCAGAATGAGCAGAGGAAGCATGCCATGGCTGTGGCTGCTGCCACTGCAGTAGCAGCTGATGCTGCAGTGGCAGCTGCTCAGGCTGTAGCTGCTGTGATCCGTTTGACTTCTGCTTCCAATGGAACATCTAAAAGCATTGAAGAGGCTGCTGCCATCAAAATCCAATCTTCCTTTCGCTCTCACCTGGCAAGAAAAGCATTGTGTGCTCTAAGAGGATTAGTGAAGTTGCAGGCACTAGTAAGGGGTCACTTGGTGAGAAAACAAGCCAAGGCAACACTGAGATGCATGCAGGCTTTGGTGACAGCACAAGTCAGAGCTCGTGCTCAGAGGATCCAAATGGGGTCTGAAGGAAACCCTAATCAAAAGCACAGAAATGCCACGGAGGATAATTTGTTCAGGCATATATATAATGAAATGGACAGAGGCTTGGAAGACAACATCAAGATTGTAGAAATGGATGTTTGTGAATCAAAAGGTAACTCCATAAGCAGAAACAGCAGTGTATGTCATCATGGACATGAAGAACAATATGACAACAGATTTTCCACACATTATTCAACAAACGGTTTCTACTCAAAGGAAGAAAATTACAAGGTATCACCGGCTCCATCAGCATTGACAGAGTTGAGTCCAAGAACCTGCAGTGGCCATTTTGAGGACTCTTTCAGCACAGCACAAAGCAGTCCTCACCCTCAGTTCTACTCTGCAGTGTCAAGAACAGAAGATTCAAAGCACCATTTTGCTTTCCCTAGGCCAGCTTATGCAGAATCTATGTCCTATGACTACCCTTTGTTCCCAAATTACATGGCTAACACTGAATCATCAAGGGCCAAAGTCAGATCACACAGTGCACCAAAACAAAGACCAGATTCATTCGAGAGGCAACCAAGCCGGCGAAGAGCTTCAGTTGAGGGAAGAAATGTCCCAAGGCCAGTGAGGATGCAAAGATCATCTTCACATATGGGTGCCACTGCCCATAACTACCATTATCCTTGGTCAATCAAGCTTGATAGATCCGCAGTTTCACTCAAAGATAGTGAATGTGGCTCTGCAAGTACAGTGCTCACTAACACTAATTATTGCAGATCACTTGTTGCATATGACCCACGTGGAGATAGGTACTGA 1410 0.444 MGKTGKWLRNLLTGKKDKEKEKGKSTTNLNCSSNGTENSTTPTCTTPKEKKRWSFRRSSASATTATTTPPTTSKELNFVETNVTVSQTVQTDTDIQNEQRKHAMAVAAATAVAADAAVAAAQAVAAVIRLTSASNGTSKSIEEAAAIKIQSSFRSHLARKALCALRGLVKLQALVRGHLVRKQAKATLRCMQALVTAQVRARAQRIQMGSEGNPNQKHRNATEDNLFRHIYNEMDRGLEDNIKIVEMDVCESKGNSISRNSSVCHHGHEEQYDNRFSTHYSTNGFYSKEENYKVSPAPSALTELSPRTCSGHFEDSFSTAQSSPHPQFYSAVSRTEDSKHHFAFPRPAYAESMSYDYPLFPNYMANTESSRAKVRSHSAPKQRPDSFERQPSRRRASVEGRNVPRPVRMQRSSSHMGATAHNYHYPWSIKLDRSAVSLKDSECGSASTVLTNTNYCRSLVAYDPRGDRY* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2187 469 MobiDBLite consensus disorder prediction 1 72 - -
Gso10g2187 469 MobiDBLite consensus disorder prediction 10 25 - -
Gso10g2187 469 Pfam IQ calmodulin-binding motif 144 162 IPR000048 GO:0005515
Gso10g2187 469 Pfam IQ calmodulin-binding motif 169 185 IPR000048 GO:0005515
Gso10g2187 469 MobiDBLite consensus disorder prediction 26 48 - -
Gso10g2187 469 ProSiteProfiles IQ motif profile. 166 193 IPR000048 GO:0005515
Gso10g2187 469 MobiDBLite consensus disorder prediction 57 72 - -
Gso10g2187 469 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 446 - -
Gso10g2187 469 Pfam Protein of unknown function (DUF4005) 347 401 IPR025064 -
Gso10g2187 469 MobiDBLite consensus disorder prediction 371 416 - -
Gso10g2187 469 MobiDBLite consensus disorder prediction 374 401 - -
Gso10g2187 469 Gene3D - 142 196 - -
Gso10g2187 469 PANTHER IQ-DOMAIN 5-RELATED 1 446 - -
Gso10g2187 469 ProSiteProfiles IQ motif profile. 142 170 IPR000048 GO:0005515
Gso10g2187 469 SMART iq_5 141 163 IPR000048 GO:0005515
Gso10g2187 469 SMART iq_5 164 185 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2187 Gso-Chr10 48918502 48921170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2187 1 457 IQD Protein Family AT4G14750 44.259 9.21e-99 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2187 - - gmx:100817667 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1196 20 41857013 41859841 Gso10g2187 10 48918502 48921170 GST