Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2182 ATGAACGGCGGCGCCACCACCGCCACCTTCCGATCCATCCTCGACAAGCCCCTCAACCAGCTTACCGAGGATGACATTTCTCAGCTCACTCGCGAAGACTGTCGCAGATTCCTCAAAGAAAAAGGGATGCGTAGGCCTTCCTGGAACAAATCGCAGGCGATCCAACAGGTCATTTCCCTGAAAGCGCTGCTGGAACCTTCCGACGATGATACTCCTCCTCCTCCTCCTCCCGCCATGCACCACCGTAGCCATGCTCAACCTCAACCTCAAGTGAATTTGAGTGAACCTCCTCCTCCTCCGCCCAAGGCTCCGCCACCTGAAGAACCCGCTTTTCATGCTGCTGAAGACATTCAGAAATCTGCGTCGTCTGGGGAAAAGCCTACGGAAACTAATGACACCAACACCAACGTTGCTAGCCCCAAAGGGTGTGCAACTAGTGGATCATTTGGGCAAATGACAATTTTCTATTGTGGTAAGGTGAATGTCTATGACAGAGTCTCGCCTGATAAGGCACGAGCAATCATGCAGCTTGCAACGAGTCCAGTCCAGCTTACTCAGGATGATCCTTTAAATGGAAATGCAGCTGTTTGGACTTCTCCTTGCCACTTACCGATGGATAAGGATGTCCTCGTTCCTGTTGATACTACAATCCTTCAGGTTGCTCAAGCAGATAAGATGGTGGAGTATCCTCTGCAATATAGGGAGAAAGGGAGCATAGCTCGTGATGCTGTGAAGGTCCATTCCTCAAATGGGAATTCAAGCCGTAGCAGTACTAGCTCTCCACCACAACCTAGACTGCCTCTAGTTTCCAGTGGTTCAGATCAGCTAAAGGTTGCCCTTCCCATTGATCTCAATGACAAAGTGTCTTTGCAGATGTTCAAGAATGCTAAAATTCAAACTAGATAG 906 0.4956 MNGGATTATFRSILDKPLNQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLEPSDDDTPPPPPPAMHHRSHAQPQPQVNLSEPPPPPPKAPPPEEPAFHAAEDIQKSASSGEKPTETNDTNTNVASPKGCATSGSFGQMTIFYCGKVNVYDRVSPDKARAIMQLATSPVQLTQDDPLNGNAAVWTSPCHLPMDKDVLVPVDTTILQVAQADKMVEYPLQYREKGSIARDAVKVHSSNGNSSRSSTSSPPQPRLPLVSSGSDQLKVALPIDLNDKVSLQMFKNAKIQTR* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2182 301 MobiDBLite consensus disorder prediction 121 140 - -
Gso10g2182 301 ProSiteProfiles Tify domain profile. 145 180 IPR010399 -
Gso10g2182 301 SMART tify_2 145 180 IPR010399 -
Gso10g2182 301 MobiDBLite consensus disorder prediction 64 140 - -
Gso10g2182 301 MobiDBLite consensus disorder prediction 245 272 - -
Gso10g2182 301 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 7 223 IPR040390 -
Gso10g2182 301 MobiDBLite consensus disorder prediction 91 108 - -
Gso10g2182 301 MobiDBLite consensus disorder prediction 245 270 - -
Gso10g2182 301 Pfam tify domain 151 178 IPR010399 -
Gso10g2182 301 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 7 223 - -
Gso10g2182 301 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2182 Gso-Chr10 48839515 48845380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2182 1 241 Tify Gene Family AT4G14720 43.243 1.18e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gso10g2182 tify 1.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2182 - - gmx:100813937 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1200 20 41964528 41970514 Gso10g2182 10 48839515 48845380 GST