Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2172 ATGGAGGAGGAAGAAGAGATTGAGTGCTTCGAGTGCCTCCAACTTCGAATAAAGTCCGATTTCTCGGAGCAAGTGTTCTTCAATTATGCCATCTCCACTTCTGCTTTTCCTTTCGGATCCTCGGCTATCGTTAATATTTCTGGTACAGCTGATGGCGAAGCTTCGGGCGCTCAATTTATATTGCAGTACATGCCGAGTCGTGATAAGAATTGTTTCATCAATTATGTAAATGAATATATTTTGGATAGTGGTGAAATCACTACTAGGAGTAGTGATCCTGGTATTGGAAGCAGTGAAGATAATAATGCTGTTAATGTTAGAATTACATCATCAGATGATTCTGACAGTGGCAAAGCTTTTTCTGGAAGCACGAGTTGTAGTCATTCTGAAAGGTTTTCTTGCTTGAGGACAATCACTTCACTCGCGCCTGTTGCTCGTGTGGGAATATCTTCCTATTCCACATTTCAAGAGGTCTCTACTGATTTCTTGTCTGGGTTAATCGAGGATCACGTCTTAGAGTCGCTTGATCTCTTCATTGAAGGGAAAGCGTCTGGACGGGACAGTGTAAATTTCCTTAGTTTAATTGGGTTGCCATCATTTGAAGAGGATCCTTTTCCAGGCTCTTTGAGGCATCCCAACATAGCTCCTGTCCTTGCAATTTTTAAAACATCTGATCACGTTAATGTAGTGCTTCCAAAGAATCCATACAACTTGGAAAGTATTCTTCATTTTAACCCCGATGCATTAAAGTCTAATTGGAATAGAATATTTCTTATGTATCAGCTACTCTCAGCCTTATCGTACATACATGGTTTAGGGGTTTCTCATGGTAATATATGCCCATCCAATATCATGTTGACTGACTCATTATGGTCTTGGCTGAGATTATGGAATGAACCCGTATTGGAATCTAATTTAACTTTGCAAGAGAGTGAAAGAGTTAATTCCGAACCTGCAAGAATTGGTTGTTGTAATGTTGGTTGTCGTTCTTATGGCCTTTATGCTGATCTAAGGCTTTCTCCAACAATAGATTGGCAATCTTGCTTTCATAAATGGTGGAGAGGAGAATTAAGTAATTTTGAATATTTACTCATCTTAAACAGATTAGCAGGAAGAAGGTGGGGGGACCATACATTTCATCCAGTAATGCCTTGGGTAATTGATTTTAGCTCAAAACCTGATGATAATTGTGACACAGGGTGGCGAGACTTGAGCAAGAGCAAATGGCGCTTAGCAAAAGGTGATGAACAATTGGATTTCACCTATTCAACATCTGAAATCCCTCATCATGTTTCAGATGAATGTCTGTCTGAATTGGCTGTCTGTAGTTATAAAGCAAGAAGACTCCCTTTGAGTGTTCTCCGAGTGGCTGTTCGTTCAGTGTATGAACCTAATGAATATCCTTCCACAATGCAGAGGCTCTATCAATGGACCCCTGATGAATGCATTCCAGAGTTTTACTGTGATGCCCAAATTTTTAAGTCAATACATGATGGAATGGCTGATTTGGCTGTACCCTCTTGGGCGGAGAGTCATGAGGATTTCATTAAATTGCATCGTGATGCATTAGAAAGTAATAGGGTGTCATTTCAACTCCATCATTGGATAGATATAACCTTTGGTTACAAAATATCTGGCCAGGCTGCTATTGCTGCTAAGAATGTTATGCTTCCTATATCAGAACCCATGATGCCAAGATCAACAGGACGTCGTCAGCTCTTTACACAACCACATCCTATCCGTCATGCCACTACCAGTACAAAACGTCATGGTTCCAATAAATATGCCAAAGTTTGGAGTCAAGCAAATGCAACGCACCGAGAGACATCTCTTCTATCTGAAACTGCTTATCTACAAGAACTAGAGCAAGCATCTACATTTTCTGAACATGCTAGGCATTTGAATGCCTTTTACCACTATCCCTTGAATCAAACGAGAGGGAAGAATATCTCATCTTCGGGAGATCCAACAACTGAGACATTTAGTGAAAGTATAAGCAAACTATCTTTGATTGACAGAAATTACCAGGTGCCATATAAAATGAATCTAATATCTTTTCTTCAACATATGAAAGAGGAAGATAAAGGCTCCTCAGGATATCCAGACTTGCTACTCTGGAAGCAGAAATTATCTTCTTCAAGACTTTGCTCTGAAGATATTGCTAGGGACATATTTTCTGTTGGTTGTCTCTTGGCTGAACTTCATCTTTGCAGGCCGCTCTTTGATCCAATCTCATTGGCAATATACTTGGAAGATGGAACTCTACCAGGGTATCTGCAGGATCTACCTCCTGATATTAGATTACTTGTTGAAGCATGCATCCAAAAGGATTGGATGAGGAGGCCATCTGCCAAAATTCTTCTGGAATCTCCTTATTTTCCAAATACTGTCAAATCCTCCTACTTGTTTCTTGCTCCACTTCAGCTTGTAGCTAAAGATGAAACTCGTCTTCGTTATGCTGCAAATCTTGCAAAGCACGGAGCTCTCAGGGAAATGGGTACCTTTGCAACTGAAATGTGCACTACCTATTGCTTACCGCTTATAGTGACTGCTGTGAGTGATACTGAAGCTGAATGGGCATATATGCTACTGAAGGAATTCATGAAATGCTTAACAGTGCAAGCAGTGAAAACATTAATCTTGCCAACCATACAGAAAATTTTACAGACCACAAGTTATTTACGTTTAAAGGTTTCCCTTCTACAAGATTCATTTGTACGGGAAATATGGAATCGAGTTGGTAAACAAGCATACCTGGAAACTATTCATCCATTGGTCTTGTCAAACTTATACATTTCTCCAGATAAAAGTTCAGCTGCCTCTGCTTCAGTGCTTCTAATCAGTTCTAGTGAGGAGCTAGGTGTACCTATTACCATCCATCAGACTATCTTGCCTCTTGTTCACTGCTTTGGGAAAGGACTATGTTCGGATGGCATTGATGTGCTGGTCAGAATTGGTGGCATTTTTGGGGAATTGTTTATCGTCAAACAGATGGTACCTTTACTGAAAAATGTTGTCCGTTCCTTCATTGATGTGTCATGCATGAATAAGCCTGATCCTGTCCAGAGTTGGAGTGCTTTAGCACTTATTGATTGCATGTTGACTTTAGATGGCCTTGTAGCTTTCTTGACAGAAGAGGTCATTGTAAAAGAGCTTCTTGAAGACCTAAGTTGCATACACATTGGGGTTCTTATGCAGAAACATATGGAAATTGCAGTGCTTCAGGTGGCTGCTTCTACTCTTTTTGGAATTTGTCAGCGGATTGGAGCAGATTTGACAGCATTGCATATTCTTCCAAAACTTAAAGAACTATTTGATGAGCTTGCTTTCTCCCAGGAAATTTCTAAAGGTTCAACTACTGTTGGCAGAAACTTGAAGGTTGGCAAAATAAAAATTGGAGGGGACTTGCATATTGAAAGTCGTATGGATCTAGTGTTGGTTCTCTATCCTTCCTTTGCATCTCTTCTTGGGATAGAGAAACTTCGTCAGTGTTGTGCTACATGGTTGATTCTTGAACAATATCTTCTACGCCATCATAATTGGAAGTGGGAATATGCTGGAGAATCATCAAAAAACGGCTCAGAAATTGTTCTTGCTAGAAGACCTGTAATAGCCCATGGATTTACGTCTGAATACAATCCTGCAAAGCTGTTGCTTAATGGGGTTGGATGGTCAATTCCACAATCCCAAGGAAGAAGTGCCAAAAATTTGATCCCTCAGAGACAACCATTTAAAGTTCATCAAAGTCCAGTAGCAGTGCATGAAGAAATGTCATACCAAATGAACCATGAACCCTGGTTTTGGTTCCCTAGTCCAGCCACCATCTGGGATGGGCCTGAATTTCTTGGGAGGGTGGGGGTTCAGAAAGATGATCTTCCATGGAAGATCAGAGCAACTGTTATATACTCTATACGTGCACATCATGGAGCAGTGAGGTCTCTGGCTGTTAACCAAGATGAATGTACTGTTTTTACTGCAGGAATTGGCCAAGGATATAAAGGAACTGTTCAGAAATGGGAATTGAGCCGAACTAACTGTTTGTCCGGCTATCATGGCCATGAGGAGGTTGTGAATGATATTTGCATCTTATCATCTAGTGGAAGAGTGGCTTCTTGTGATGGAACAATTCACATTTGGAATAGTCAAACAGGGAAACAAATATTAGTATTTGCTGAGTCCCAGACAGAATCTGGCCATCCTACAAGCCATCCATCCTCTTCATCAAAAATTAACAGTGACCAGGCAAATGTGCTTAATTTGAATACACTATCCAGTGGAATATTGTCTAGTGCTTTTGACTCAAGCCTTTATACTTGTATGCATCTATTAAACTCCGCTGAAACTCTTGTAGTTGGAACTGGAAATGGTTCTCTGAGGTTCTTTGATGTTGCTCGAGGTCAAAAGCTTCATATCTGGAGAGGCGAATCTACTGAATCTAGTTTTCCTTCACTTATTTCTGCTATTTGTTCCACTGGCTCTGACAAGATGCAAGCAGGTGGAATTTCCACTTTTCCATCTTTTATTGCAGCTGGACTAAGTTCTGGGCACTGTAAATTATTTGATGCAAAGAGTGGAAATGTCATTTCCTCTTGGCGAGCTCATGATGGATATGTGACAAAGTTGGCAGCACCTGAGGAACATCTGCTTGTTTCCAGCTCTTTGGACAGAACTTTACGAGTCTGGGACTTAAGAATGAATTTATCATCGCAGCCCATTATTTTCAGAGGTCATTCAGATGGCATATCCAGTTTCTCCATTTGGGGCCAAGATGTTATTTCAATTTCCCGGAATAGAATTGGGCTTCTCTCCTTGTCTAAATCTCCCAATGAAACAGATGGGCAGCATCACATTAGCCCTCAGAAACTATATGTTTCTGATAATGGTCAGAGAAGCTTGTCAGCGTTATCAAGTATTAGTATACTTCCATTCTCTCGATTGTTTCTCATTGGAACCGAAGATGGTTATCTGAGAATCTGTTGTTAA 4983 0.4046 MEEEEEIECFECLQLRIKSDFSEQVFFNYAISTSAFPFGSSAIVNISGTADGEASGAQFILQYMPSRDKNCFINYVNEYILDSGEITTRSSDPGIGSSEDNNAVNVRITSSDDSDSGKAFSGSTSCSHSERFSCLRTITSLAPVARVGISSYSTFQEVSTDFLSGLIEDHVLESLDLFIEGKASGRDSVNFLSLIGLPSFEEDPFPGSLRHPNIAPVLAIFKTSDHVNVVLPKNPYNLESILHFNPDALKSNWNRIFLMYQLLSALSYIHGLGVSHGNICPSNIMLTDSLWSWLRLWNEPVLESNLTLQESERVNSEPARIGCCNVGCRSYGLYADLRLSPTIDWQSCFHKWWRGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSSKPDDNCDTGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRVAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDAQIFKSIHDGMADLAVPSWAESHEDFIKLHRDALESNRVSFQLHHWIDITFGYKISGQAAIAAKNVMLPISEPMMPRSTGRRQLFTQPHPIRHATTSTKRHGSNKYAKVWSQANATHRETSLLSETAYLQELEQASTFSEHARHLNAFYHYPLNQTRGKNISSSGDPTTETFSESISKLSLIDRNYQVPYKMNLISFLQHMKEEDKGSSGYPDLLLWKQKLSSSRLCSEDIARDIFSVGCLLAELHLCRPLFDPISLAIYLEDGTLPGYLQDLPPDIRLLVEACIQKDWMRRPSAKILLESPYFPNTVKSSYLFLAPLQLVAKDETRLRYAANLAKHGALREMGTFATEMCTTYCLPLIVTAVSDTEAEWAYMLLKEFMKCLTVQAVKTLILPTIQKILQTTSYLRLKVSLLQDSFVREIWNRVGKQAYLETIHPLVLSNLYISPDKSSAASASVLLISSSEELGVPITIHQTILPLVHCFGKGLCSDGIDVLVRIGGIFGELFIVKQMVPLLKNVVRSFIDVSCMNKPDPVQSWSALALIDCMLTLDGLVAFLTEEVIVKELLEDLSCIHIGVLMQKHMEIAVLQVAASTLFGICQRIGADLTALHILPKLKELFDELAFSQEISKGSTTVGRNLKVGKIKIGGDLHIESRMDLVLVLYPSFASLLGIEKLRQCCATWLILEQYLLRHHNWKWEYAGESSKNGSEIVLARRPVIAHGFTSEYNPAKLLLNGVGWSIPQSQGRSAKNLIPQRQPFKVHQSPVAVHEEMSYQMNHEPWFWFPSPATIWDGPEFLGRVGVQKDDLPWKIRATVIYSIRAHHGAVRSLAVNQDECTVFTAGIGQGYKGTVQKWELSRTNCLSGYHGHEEVVNDICILSSSGRVASCDGTIHIWNSQTGKQILVFAESQTESGHPTSHPSSSSKINSDQANVLNLNTLSSGILSSAFDSSLYTCMHLLNSAETLVVGTGNGSLRFFDVARGQKLHIWRGESTESSFPSLISAICSTGSDKMQAGGISTFPSFIAAGLSSGHCKLFDAKSGNVISSWRAHDGYVTKLAAPEEHLLVSSSLDRTLRVWDLRMNLSSQPIIFRGHSDGISSFSIWGQDVISISRNRIGLLSLSKSPNETDGQHHISPQKLYVSDNGQRSLSALSSISILPFSRLFLIGTEDGYLRICC* 1661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2172 1660 SUPERFAMILY Protein kinase-like (PK-like) 208 291 IPR011009 -
Gso10g2172 1660 CDD Beach 351 581 IPR000409 -
Gso10g2172 1660 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1531 1564 - -
Gso10g2172 1660 Gene3D Transferase(Phosphotransferase) domain 1 206 299 - -
Gso10g2172 1660 Gene3D - 1275 1496 IPR015943 GO:0005515
Gso10g2172 1660 SMART WD40_4 1524 1562 IPR001680 GO:0005515
Gso10g2172 1660 SMART WD40_4 1297 1340 IPR001680 GO:0005515
Gso10g2172 1660 SMART WD40_4 1625 1660 IPR001680 GO:0005515
Gso10g2172 1660 SMART WD40_4 1343 1380 IPR001680 GO:0005515
Gso10g2172 1660 SMART WD40_4 1425 1462 IPR001680 GO:0005515
Gso10g2172 1660 PANTHER GH12955P 6 1660 - -
Gso10g2172 1660 SUPERFAMILY Protein kinase-like (PK-like) 719 813 IPR011009 -
Gso10g2172 1660 ProSiteProfiles Trp-Asp (WD) repeats profile. 1531 1564 IPR001680 GO:0005515
Gso10g2172 1660 Gene3D - 1497 1660 IPR015943 GO:0005515
Gso10g2172 1660 Gene3D BEACH domain 341 581 IPR036372 -
Gso10g2172 1660 SMART Beach_2 349 581 IPR000409 -
Gso10g2172 1660 Gene3D Transferase(Phosphotransferase) domain 1 705 801 - -
Gso10g2172 1660 Pfam Beige/BEACH domain 351 561 IPR000409 -
Gso10g2172 1660 MobiDBLite consensus disorder prediction 90 126 - -
Gso10g2172 1660 CDD PKc 208 289 - -
Gso10g2172 1660 SUPERFAMILY BEACH domain 336 581 IPR036372 -
Gso10g2172 1660 ProSitePatterns Trp-Asp (WD) repeats signature. 1549 1563 IPR019775 -
Gso10g2172 1660 ProSiteProfiles BEACH domain profile. 337 609 IPR000409 -
Gso10g2172 1660 Pfam WD domain, G-beta repeat 1526 1562 IPR001680 GO:0005515
Gso10g2172 1660 Pfam WD domain, G-beta repeat 1345 1380 IPR001680 GO:0005515
Gso10g2172 1660 SUPERFAMILY WD40 repeat-like 1299 1658 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2172 Gso-Chr10 48778724 48788587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2172 721 799 MAP Kinase Kinase Kinase AT3G07980 38.095 8.77e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Gso10g2172 Beach 3.8e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2172 K17601 - gmx:100809116 3311.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1207 20 42013401 42023030 Gso10g2172 10 48778724 48788587 GST