Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2163 ATGGAAGACAATGCCTTGGTGCTGTTGTTCTATCCTGGCCGTCACAAGTGGAAGCTTCTCATGTCTCCTTTGCTGCTCATGCTCTTGCTTATCTCACCACTGGCTTCCTCCTTCAGTGAAGAAGGACAAGCGTTAATGGCTATGAAGGCTTTGTTCAGTAATATGGCAGACGTTCTCCTTGACTGGGATGACGCGCATAATGACGACTTTTGCTCTTGGCGTGGAGTTTTCTGTGACAATGTCAGCCATACTGTGGTTTCTCTGAACCTGTCCAGTTTGAACCTTGGTGGAGAGATATCACCGGCCATTGGTGACTTGACAAACTTGCAATCCATAGACTTGCAAGGGAATAAACTAACTGGGCAAATCCCTGATGAAATTGGAAACTGTGCAGCACTTGTTCATCTGGATTTGTCCGATAATCAGCTTTATGGTGATATACCTTTCTCATTGTCAAAGTTGAAGCAGCTCGAGCTTTTAAATTTAAAGAGCAATCAATTGACTGGTCCTATCCCTTCAACTTTATCCCAAATTCCCAACCTCAAGACTCTGGATCTTGCTCGGAATAGGCTCAGTGGCGAGATACCAAGAATACTCTATTGGAATGAAGTCTTGCAGTACCTTGGGTTGCGTGGGAACATGTTGAGTGGTACTTTGTCCCGTGATATCTGTCAATTAACTGGTTTGTGGTATTTTGATGTGAGAGGTAATAATTTGACTGGTACTATACCTGACAACATTGGGAACTGTACAAGTTTTGAAATCTTGGACATATCGTATAATCAGATTACTGGGGAGATTCCATTTAATATTGGATTTCTGCAAGTTGCTACTTTGTCACTTCAAGGAAATAGACTAACTGGGAAGATTCCAGAAGTGATTGGTTTAATGCAAGCCCTTGCAATATTGGATTTGAGTGAGAATGAGTTAGTGGGCTCGATTCCCCCCATTCTTGGTAATCTGACTTTCACTGGCAAATTGTACCTTCATGGAAACATGCTTACGGGTCCTATACCTCCTGAACTTGGCAATATGTCCAAACTGAGCTACCTGCAATTGAATGATAACGGCCTAGTGGGTAATATTCCAAATGAATTTGGGAAGCTAGAACATCTTTTTGAATTGAATCTCGCGAACAATCATCTTGATGGAACTATCCCACATAACATAAGCTCCTGCACTGCCTTAAATCAATTTAATGTGCATGGTAATCAGTTAAGCGGTTCTATTCCATTGAGCTTCCGCAGCCTAGAGAGTTTGACATGCTTAAACCTCTCATCAAACAACTTCAAGGGGATTATACCAGTTGAGTTGGGGCATATCATTAATCTAGATACATTGGATCTATCTAGCAATAATTTTTCAGGGCATGTGCCAGCATCTGTTGGTTATCTAGAGCATCTCCTGACCCTGAATTTGAGTCATAACCACCTTGATGGTTCCTTGCCTGCTGAATTTGGGAATCTCAGAAGCATTGAGATTCTTGATTTGTCATTCAACAATATCTCTGGTAGCATTCCTCCGGAAATTGGACAGCTGCAGAACCTTATGTCTCTGTTTATGAACCACAATGATCTGCGTGGGAAGATTCCTGATCAGTTGACTAATTGTTTCAGTCTAACCTCACTAAATTTGTCCTATAATAACCTTTCTGGTGTAATTCCTTCAATGAAGAACTTCTCATGGTTTTCTGCTGACAGCTTCCTTGGAAATTCTTTACTATGTGGAGATTGGTTAGGATCAAAATGCCGTCCTTACATACCAAAATCAAGAGAGATTTTTTCGAGAGTTGCTGTTGTATGCCTCATTCTTGGAATTATGATATTGTTGGCCATGGTATTTGTAGCATTCTACAGATCCAGCCAATCGAAGCAATTGATGAAAGGAACCAGTGGAACTGGGCAAGGCATGTTGAATGGTCCTCCAAAACTAGTTATTCTTCACATGGATATGGCTATCCACACCTTGGATGATATAATCAGAGGTACTGAGAATCTCAGTGAGAAATATATCATAGGGTATGGTGCCTCTAGCACTGTATACAAATGTGTTTTGAAGAATTCCCGACCAATTGCAATTAAGCGACTGTACAACCAACAACCACACAATATAAGGGAGTTTGAGACCGAACTTGAAACAGTTGGTAGCATTAGACATAGAAATCTTGTCACCTTGCATGGATATGCTCTTACTCCCTATGGAAATCTTCTTTTCTATGACTATATGGCGAATGGCTCACTGTGGGATCTTCTACATGGTCCTTTGAAGGTGAAACTTGATTGGGAAACTCGCCTGAGGATTGCTGTTGGAGCAGCCGAAGGGCTTGCATATCTCCATCATGACTGCAATCCACGAATAGTTCACAGAGACATCAAGTCTTCAAATATTCTGTTGGATGAGAACTTTGAGGCGCATCTTTCTGACTTTGGCACGGCAAAATGTATCTCAACAGCAAAAACTCACGCATCAACTTATGTCCTTGGAACTATAGGCTATATTGACCCTGAGTATGCCCGAACATCTAGGCTGAATGAAAAATCAGATGTGTATAGTTTTGGAATAGTTCTGCTGGAGCTACTTACTGGGAAGAAGGCCGTGGACAATGAGTCCAATTTGCATCAATTGATATTGTCCAAGGCAGATAACAACACTGTAATGGAAGCTGTGGATCCAGAGGTCTCTATTACCTGCACTGATCTGGCTCATGTCAAGAAGACCTTTCAGCTTGCTTTGCTTTGCACGAAAAAGAACCCTTCTGAGAGGCCTAGCATGCATGAAGTAGCCAGGGTGCTGGTATCACTACTTCCTTCACCTCCAAGTAAAATCCTTGCCCCTCCTGCAAAGAAGTTCGACTATGCGCATTTTGTGATCGAGAAGGGACAACAGAGAAAAATGGAAGAACAAAAACCTCAGCAGGATAACAACTCATCCAATGCTCAATGGTTTGTTCGCTTTGGGGATGTTATCTCCAAGAGCACTTGA 2982 0.4192 MEDNALVLLFYPGRHKWKLLMSPLLLMLLLISPLASSFSEEGQALMAMKALFSNMADVLLDWDDAHNDDFCSWRGVFCDNVSHTVVSLNLSSLNLGGEISPAIGDLTNLQSIDLQGNKLTGQIPDEIGNCAALVHLDLSDNQLYGDIPFSLSKLKQLELLNLKSNQLTGPIPSTLSQIPNLKTLDLARNRLSGEIPRILYWNEVLQYLGLRGNMLSGTLSRDICQLTGLWYFDVRGNNLTGTIPDNIGNCTSFEILDISYNQITGEIPFNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELVGSIPPILGNLTFTGKLYLHGNMLTGPIPPELGNMSKLSYLQLNDNGLVGNIPNEFGKLEHLFELNLANNHLDGTIPHNISSCTALNQFNVHGNQLSGSIPLSFRSLESLTCLNLSSNNFKGIIPVELGHIINLDTLDLSSNNFSGHVPASVGYLEHLLTLNLSHNHLDGSLPAEFGNLRSIEILDLSFNNISGSIPPEIGQLQNLMSLFMNHNDLRGKIPDQLTNCFSLTSLNLSYNNLSGVIPSMKNFSWFSADSFLGNSLLCGDWLGSKCRPYIPKSREIFSRVAVVCLILGIMILLAMVFVAFYRSSQSKQLMKGTSGTGQGMLNGPPKLVILHMDMAIHTLDDIIRGTENLSEKYIIGYGASSTVYKCVLKNSRPIAIKRLYNQQPHNIREFETELETVGSIRHRNLVTLHGYALTPYGNLLFYDYMANGSLWDLLHGPLKVKLDWETRLRIAVGAAEGLAYLHHDCNPRIVHRDIKSSNILLDENFEAHLSDFGTAKCISTAKTHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNESNLHQLILSKADNNTVMEAVDPEVSITCTDLAHVKKTFQLALLCTKKNPSERPSMHEVARVLVSLLPSPPSKILAPPAKKFDYAHFVIEKGQQRKMEEQKPQQDNNSSNAQWFVRFGDVISKST* 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2163 993 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Gso10g2163 993 Pfam Protein kinase domain 669 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2163 993 SUPERFAMILY L domain-like 40 334 - -
Gso10g2163 993 Gene3D Transferase(Phosphotransferase) domain 1 742 939 - -
Gso10g2163 993 Gene3D Ribonuclease Inhibitor 38 203 IPR032675 -
Gso10g2163 993 SUPERFAMILY Protein kinase-like (PK-like) 646 931 IPR011009 -
Gso10g2163 993 Gene3D Phosphorylase Kinase; domain 1 641 741 - -
Gso10g2163 993 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 29 971 - -
Gso10g2163 993 Pfam Leucine rich repeat 443 502 IPR001611 GO:0005515
Gso10g2163 993 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 29 971 - -
Gso10g2163 993 Pfam Leucine Rich repeat 179 194 IPR001611 GO:0005515
Gso10g2163 993 Pfam Leucine Rich repeat 537 552 IPR001611 GO:0005515
Gso10g2163 993 Pfam Leucine Rich repeat 249 266 IPR001611 GO:0005515
Gso10g2163 993 SUPERFAMILY L domain-like 319 576 - -
Gso10g2163 993 Pfam Leucine Rich Repeat 108 130 IPR001611 GO:0005515
Gso10g2163 993 Gene3D Ribonuclease Inhibitor 204 277 IPR032675 -
Gso10g2163 993 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Gso10g2163 993 ProSiteProfiles Protein kinase domain profile. 666 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2163 993 SMART serkin_6 666 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2163 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Gso10g2163 993 SMART LRR_typ_2 465 488 IPR003591 -
Gso10g2163 993 SMART LRR_typ_2 489 513 IPR003591 -
Gso10g2163 993 SMART LRR_typ_2 178 202 IPR003591 -
Gso10g2163 993 SMART LRR_typ_2 154 177 IPR003591 -
Gso10g2163 993 SMART LRR_typ_2 417 440 IPR003591 -
Gso10g2163 993 SMART LRR_typ_2 297 321 IPR003591 -
Gso10g2163 993 SMART LRR_typ_2 226 250 IPR003591 -
Gso10g2163 993 SMART LRR_typ_2 369 393 IPR003591 -
Gso10g2163 993 SMART LRR_typ_2 106 130 IPR003591 -
Gso10g2163 993 Gene3D Ribonuclease Inhibitor 278 586 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2163 Gso-Chr10 48666466 48674043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2163 108 993 Receptor kinase-like Gene Family AT5G07180 75.197 0.0 1339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Gso10g2163 Pkinase 3.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2163 K20718 - gmx:100811653 1799.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1215 20 42117402 42125380 Gso10g2163 10 48666466 48674043 GST