Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2156 ATGTTCATGAGTCCAATCACTCCAATGGAAAAGATGGTTCTCATTCTAGCTAGCTATCTCCTCTTGAGTACACTCTTTTCTGCTAATGCTGAATTTGTCAAGAAGACTTACATCATTCAAATGGATAAGTCAGCAAAGCCCGACACCTTCTCCAATCACCTCGATTGGTATTCATCAAAAGTGAAATCAATTTTGTCCAAATCAGTAGAAGCTGAGATGGACAAGGAAGAGAGAATCATTTACACTTACCAAACTGCTTTCCATGGAGTGGCTGCCAAGTTGAGCCAAGAAGAAGCTGAGAAGCTAGAGGCAGAAGAAGGTGTTGTGGCCATATTCCCTGATACTAAGTACCAACTACACACCACAAGAAGTCCAACTTTCCTTGGACTTGAACCAACACAAAGCACCAACAACGTGTGGTCAGAAAAGCTAGCCAACCATGATGTCATAGTGGGAGTGCTAGACACTGGGGTTTGGCCTGAGAGTGAGAGCTTCAATGACACTGGCATGAGACCAGTACCTTCTCACTGGAAAGGTGCATGTGAGACTGGTAGAGGCTTCAGAAAACATCACTGCAACAACAAGATTGTGGGGGCAAGAATGTTCTACCATGGATATGAAGCAGCAACTGGTAAAATTGATGAGCAAGCAGAATACAAATCACCAAGAGACCAAGATGGTCATGGCACTCACACTGCAGCTACAGTTGCCGGCTCTCCAGTGCATGGTGCTAATCTTCTAGGTTATGCTTATGGCACAGCAAGAGGAATGGCACCAGGAGCAAGAATTGCAGCATACAAAGTATGTTGGACTGGTGGATGCTTCAGCTCAGATATTCTATCAGCTGTTGACAGAGCTGTGGATGATGGAGTTGATGTCCTATCCATCTCTTTGGGTGGTGGAGTCTCCTCTTACTACCGTGATAGTTTATCTGTAGCCTCATTTGGAGCAATGGAGAAAGGTGTTTTTGTTTCATGCTCTGCTGGAAATGCAGGACCTGACCCTGTGAGCCTCACAAATGTGTCACCTTGGATCACCACAGTTGGAGCAAGCACAATGGATAGAGATTTTCCTGCAGATGTTAGTCTTGGAAATGGAAGAAAGATAACCGGAACCTCACTCTACAAAGGGAGAAGCATGCTCTCAGTTAAGAAACAATACCCTTTAGTATACATGGGAGATACTAACTCAAGCATCCCTGATCCAAAATCTCTGTGCTTGGAAGGTACATTGGATCGTAGAATGGTTTCAGGCAAGATTGTTATTTGTGACAGAGGCATAAGTCCAAGAGTGCAGAAGGGTCAAGTGGTGAAAAATGCAGGAGGGGTGGGAATGATTCTCATAAACACTGCAGCCAATGGAGAGGAGCTGGTTGCTGATTGTCACCTCCTTCCAGCAGTTGCAATTGGAGAGAAAGAAGGAAAAGAGCTCAAACACTATGTGTTAACAAGTAAAAAAAAAGCTACTGCAACTCTAGGTTTTCGTGCCACAAGGTTGGGAGTTAGACCATCTCCTGTAGTGGCAGCATTTTCGTCAAGAGGGCCTAATTTTCTCACCCTTGAGATTCTGAAGCCTGATGTGGTGGCTCCTGGTGTGAACATTCTTGCTGCTTGGAGTGAGGCAATTGGTCCATCAAGTTTGCCAACAGATCACAGAAGGGTGAAGTTCAACATACTCTCAGGAACTTCAATGTCATGTCCTCATGTGAGTGGCATTGCTGCTTTGCTCAAGGCTAGGCATCCAGATTGGAGTCCTGCAGCCATAAAATCAGCTTTGATGACCACTGCTTATGTTCATGACAATACCATCAAGCCTCTCAGAGATGCCTCAAATGCTGAAGCCTCAACTCCTTATGATCATGGTGCTGGACACATCAACCCTAGAAGAGCTCTTGATCCAGGTTTGGTCTATGATATTCAGCCACAGGACTACATTGAATTCCTGTGCTCACTGAAGCTGACTACATCTGAGCTTGGAGTTTTTGCTAAGTATTCAAACAGAACTTGCAGGCACTCTCTTTCAAGTCCAGGGGACTTGAACTATCCAGCCATATCTGTAGTTTTTCCACTGAAAAATTCCACTTCTGTTTTGACAGTTCACAGAACTGCCACCAATGTTGGCCTTCCAGTTTCCAAGTACCATGTTGTGGTTTCATCTTTTAAAGGCGCTTCCGTTAAGGTTGAGCCAGACACCTTGAGTTTTACCAGAAAATACCAGAAATTATCTTACAAAGTTACCTTCACAACACAATCTCGCCAAACAGAACCTGAATTTGGAGGTCTGGTGTGGAAGGATGGTGTGCAGAAGGTGAGGAGTGCAATTGTTATAACGTATCTGCCACCAATATGA 2349 0.4449 MFMSPITPMEKMVLILASYLLLSTLFSANAEFVKKTYIIQMDKSAKPDTFSNHLDWYSSKVKSILSKSVEAEMDKEERIIYTYQTAFHGVAAKLSQEEAEKLEAEEGVVAIFPDTKYQLHTTRSPTFLGLEPTQSTNNVWSEKLANHDVIVGVLDTGVWPESESFNDTGMRPVPSHWKGACETGRGFRKHHCNNKIVGARMFYHGYEAATGKIDEQAEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMAPGARIAAYKVCWTGGCFSSDILSAVDRAVDDGVDVLSISLGGGVSSYYRDSLSVASFGAMEKGVFVSCSAGNAGPDPVSLTNVSPWITTVGASTMDRDFPADVSLGNGRKITGTSLYKGRSMLSVKKQYPLVYMGDTNSSIPDPKSLCLEGTLDRRMVSGKIVICDRGISPRVQKGQVVKNAGGVGMILINTAANGEELVADCHLLPAVAIGEKEGKELKHYVLTSKKKATATLGFRATRLGVRPSPVVAAFSSRGPNFLTLEILKPDVVAPGVNILAAWSEAIGPSSLPTDHRRVKFNILSGTSMSCPHVSGIAALLKARHPDWSPAAIKSALMTTAYVHDNTIKPLRDASNAEASTPYDHGAGHINPRRALDPGLVYDIQPQDYIEFLCSLKLTTSELGVFAKYSNRTCRHSLSSPGDLNYPAISVVFPLKNSTSVLTVHRTATNVGLPVSKYHVVVSSFKGASVKVEPDTLSFTRKYQKLSYKVTFTTQSRQTEPEFGGLVWKDGVQKVRSAIVITYLPPI* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2156 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 561 571 IPR023828 -
Gso10g2156 782 Gene3D - 354 500 - -
Gso10g2156 782 SUPERFAMILY Subtilisin-like 119 635 IPR036852 GO:0004252|GO:0006508
Gso10g2156 782 CDD PA_subtilisin_like 360 492 - -
Gso10g2156 782 ProSiteProfiles Serine proteases, subtilase domain profile. 116 631 - -
Gso10g2156 782 Pfam Fibronectin type-III domain 678 776 IPR041469 -
Gso10g2156 782 CDD Peptidases_S8_3 117 597 IPR034197 -
Gso10g2156 782 SUPERFAMILY Protease propeptides/inhibitors 35 118 - -
Gso10g2156 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 120 IPR037045 -
Gso10g2156 782 Pfam Peptidase inhibitor I9 36 120 IPR010259 -
Gso10g2156 782 Gene3D Peptidase S8/S53 domain 148 644 IPR036852 GO:0004252|GO:0006508
Gso10g2156 782 PRINTS Subtilisin serine protease family (S8) signature 146 165 IPR015500 -
Gso10g2156 782 PRINTS Subtilisin serine protease family (S8) signature 224 237 IPR015500 -
Gso10g2156 782 PRINTS Subtilisin serine protease family (S8) signature 560 576 IPR015500 -
Gso10g2156 782 Gene3D - 648 779 - -
Gso10g2156 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 776 IPR045051 -
Gso10g2156 782 Pfam Subtilase family 148 601 IPR000209 GO:0006508|GO:0008236
Gso10g2156 782 PANTHER XYLEM SERINE PROTEINASE 1 26 776 - -
Gso10g2156 782 Pfam PA domain 386 477 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2156 Gso-Chr10 48602400 48605289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2156 3 782 Subtilisin-like Serine Gene Family AT5G51750 69.349 0.0 1123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2156 - - gmx:100804847 1540.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2156 10 48602400 48605289 Gso10g2156 10 48602400 48605289 ECH
Gso20g1222 20 42195070 42197893 Gso10g2156 10 48602400 48605289 GST
Gso16g1616 16 36797286 36799972 Gso10g2156 10 48602400 48605289 PCT
Gso9g1241 9 35556729 35559417 Gso10g2156 10 48602400 48605289 PCT
Gso10g2156 10 48602400 48605289 Gso16g1616 16 36797286 36799972 PCT
Gso10g2156 10 48602400 48605289 Gso9g1241 9 35556729 35559417 PCT