Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2155 ATGCCATCACGACAATTGTCAACGTTAGCACCGCCTCCCAACCACCACAACCACCGCGTCTCAACCACTCTCGTTGCTTCCACCGCCTCCGTTTGCTCTGTTTTCTTTTTACTTCTCCTCTGCTTCCGCAAGCGTAAACGCACCACCCCCTCCTCCGACTCCGACTCTAACCCTCCTCATCCGTTCTCCTACCCCGTCCTCCGCCGCGCCACCAACTCGTTCTCGACTCGCCTCGGCCACGGCGGCTTCGGCCCCGTCTTCTCCGGCACCCTCGCCGGCGAGCCCGTGGCCGTCAAGCTCATGGACTCCGCTTCCCTCCAGGGCGAGCGCGAGTTCCACAACGAGCTCTTGTTCGCATCCAGACTCCGGTCCCCTTTAGTGGTCCCCGCAATCGGATTCTCCTCCGACCCCAAACGACGCCGTTTCCTCCTCGTCTATCACCTCATGCACAACGGCAACCTCCACGACGCTCTCTTGCGACGCAAAACCCCTCACCTCACGCTCTGGAAAAACCGCTTCTCCATAATCCTCGACGTCGCAAAAGGAATCCTCTACCTCCACTCCCTCGACCCCCCCATAATCCACGGCGACATCAAACCTAGCAATATTCTTCTCGACAATTCCTTCTCCGCAAAACTCGCTGACTTTGGCCTCGCGCGCTTAAAATCGGAGATAGAAGAATTCAAACTAAAACGCGAGGAAAAGAAAAAGGAAGAGTCAGAGAGCGACGCCGGGTCCGAATTAGAAACTCAGAGCGTCAACACTGAACAGTCATTTGATGATGCTGGTAGACAGAACACTGCCTCGGATTATGTGAAGGATTGGATTGGGAAGGAGGTGAAAAAAGAAAGGCCGAACGAGGTGAAGAAGAATGGTTATGCTGTTGCTGCAGCATCGAGTAGCGGAATTGTGGAGAAGAAGAAAAGTAGTAGGAAGAAATTGGAATGGTGGGAATCCATGGACGATAGTGGAGTTTTGAAGAAGGAAAAGAGAAGGCAAGCGAGGGAATGGTGGAAGGAGGAGTATTCGGAGGAGCTTTCAAGGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAAGGGTAATGATGATGATGATGATGATGATAATAATGTGGAGGTAGATGATGTGTACGGTGATGCACATGGTTACAAGAGGGAGAAGAACCGGAGTAGGAAAAGTGGTGGCAGTGTAGATTCATGGTTCAGCGGGGAGCTACGTGGAATTGGGTGGAATAGTTATGATTCAGCGACGGGGAGTGGAGAGATAGTAGCAAAGAGTGGGGGTGTGAGTAGCACTCCGAGTATGAGGGGAACGGTTTTCTACGTTGCACCCGAGTATGGTTACAATGGGGATGCGTCAGAGAAGTGTGACGTGTACAGCTTGGGGGTATTGTTGCTGGTTATTGTATCAGGGAGGAGACCGCTTCAGGTGAGCGGTTCGGCGATATGGGAGTATAAGCGTGCGAATCTGGTGTCTTGGGCGAGGCAATGCGAGCGGAGAGGGAAGCTTCTGGAAGTGGTGGATGAGAGCGTTGAAGGGTTGGATAAAGAGCAGGCTAGTCTGTGCGTGACGGTTGCGTTGATGTGTTTGCTAAAGTCACCTGCTCGTCGTCCTTCCATGAAGGAGGTTGTGGGAATGCTCAGTGGGGAGATGGAGCCTCCGCAGTACTCACTGCAGCAGCAACAGGCCAAGTTCCCGTTCCAGCCTCCGAAAGTAGGCCCATGA 1737 0.5273 MPSRQLSTLAPPPNHHNHRVSTTLVASTASVCSVFFLLLLCFRKRKRTTPSSDSDSNPPHPFSYPVLRRATNSFSTRLGHGGFGPVFSGTLAGEPVAVKLMDSASLQGEREFHNELLFASRLRSPLVVPAIGFSSDPKRRRFLLVYHLMHNGNLHDALLRRKTPHLTLWKNRFSIILDVAKGILYLHSLDPPIIHGDIKPSNILLDNSFSAKLADFGLARLKSEIEEFKLKREEKKKEESESDAGSELETQSVNTEQSFDDAGRQNTASDYVKDWIGKEVKKERPNEVKKNGYAVAAASSSGIVEKKKSSRKKLEWWESMDDSGVLKKEKRRQAREWWKEEYSEELSRKKKKKKKKKKKKKRKGNDDDDDDDNNVEVDDVYGDAHGYKREKNRSRKSGGSVDSWFSGELRGIGWNSYDSATGSGEIVAKSGGVSSTPSMRGTVFYVAPEYGYNGDASEKCDVYSLGVLLLVIVSGRRPLQVSGSAIWEYKRANLVSWARQCERRGKLLEVVDESVEGLDKEQASLCVTVALMCLLKSPARRPSMKEVVGMLSGEMEPPQYSLQQQQAKFPFQPPKVGP* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2155 578 MobiDBLite consensus disorder prediction 348 383 - -
Gso10g2155 578 Gene3D Transferase(Phosphotransferase) domain 1 59 251 - -
Gso10g2155 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Gso10g2155 578 Pfam Protein kinase domain 435 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2155 578 Pfam Protein tyrosine and serine/threonine kinase 74 231 IPR001245 GO:0004672|GO:0006468
Gso10g2155 578 SMART serkin_6 72 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2155 578 SUPERFAMILY Protein kinase-like (PK-like) 56 563 IPR011009 -
Gso10g2155 578 MobiDBLite consensus disorder prediction 232 264 - -
Gso10g2155 578 Gene3D Transferase(Phosphotransferase) domain 1 420 570 - -
Gso10g2155 578 MobiDBLite consensus disorder prediction 557 578 - -
Gso10g2155 578 MobiDBLite consensus disorder prediction 246 264 - -
Gso10g2155 578 Coils Coil 218 241 - -
Gso10g2155 578 PANTHER OS07G0586332 PROTEIN 1 577 IPR044576 -
Gso10g2155 578 ProSiteProfiles Protein kinase domain profile. 72 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2155 578 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 1 577 - -
Gso10g2155 578 Coils Coil 339 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2155 Gso-Chr10 48593369 48595724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2155 429 548 Receptor kinase-like Gene Family AT3G58690 38.095 4.04e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Gso10g2155 PK_Tyr_Ser-Thr 1.9e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2155 - - gmx:100817816 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2155 10 48593369 48595724 Gso10g2155 10 48593369 48595724 ECH
Gso20g1223 20 42207315 42210493 Gso10g2155 10 48593369 48595724 GST
Gso16g1614 16 36778404 36782080 Gso10g2155 10 48593369 48595724 PCT
Gso9g1239 9 35538171 35541258 Gso10g2155 10 48593369 48595724 PCT
Gso10g2155 10 48593369 48595724 Gso16g1614 16 36778404 36782080 PCT
Gso10g2155 10 48593369 48595724 Gso9g1239 9 35538171 35541258 PCT