Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2146 ATGGGCAAGGAGTGGCATTGGAGTGGAAGGTCCTCCAAGAGAGGTGGAGGTGCTGAAACAGAAATCCCTTCCGGTTGCATGTGTGCAATGTTTCAGGCCTTTGATTTTCATCCTTTTCACTTTTCCATTAACCAGCAACAATCCTCTATCAAGTCTCCCACCCCAGAAGACCACACTGTCCTCAAAGGAGCAGAAGCACCAAGGAGTAGCTTGGAGTCGGAAACTGGTACTACAGTGTCATCGATTTCAAAAGAAGAAAATTTTAAAATACCAAAGAACATTCGAATCAAAACAAGAGGGAGCGGCACAAGATCAAGAACAGAAAGTTTTAGTGATCTTTCTTCAGAAATCAGTGCCTCTCCAGGGACCAAGACACCAACTTTGGTTGCAAGATTGATGGGTCTTGATCTTCTTCCTGATGCACATTCCTCTTCTTCCCCATCCCTTTCCACTCCGAACCTTCACAAACCACGGCAACACATCAAAATAATCAAACATAGAAACAGCACAGGCAGTAACACCTTGCCTGAGACTCCTAGAATGTCCTCTGGAAGAAGATCAGATGTCGAGCATAGACTCTCTCTCCAAATCAACAAGGAGAACAACACAGTCCCCTTTGAGGATTTTGAGTCTCCTCGGTTTTCATTTTCAAAGAGGAAATATTATGAGAACAGTTGCAGGAGTCCAAGCCATTATGCTAGGCAAATTGTCAAACAAGTGAAAGAAAGTGTGAGCAGAAAGGTTGGATTAGACATCACCAACACTGTCAAGAACAGAGAACACGGAAGAGAAGAATCTGTAGGCCAATTCAAATTCAAGAAAACTCCTAAAACTTCAGTGAATGAATCCAGCCCTGGAAAACACTCAAACTCATCTTACTCCCCAAGGCTCAGCAGATTCATTGATACCAAACACAAACCAAGCACAACGCCACCATCACCAACTACTCCAAAAAACCAAAACACACACTCAATACTAAAACCACCATCACCAACTACTTCAAAAAATCAAAACCCACACTCAATACTAAAGCCACCATCACCTCCTCCAGTAGTCAACATTGAAACACAGCTTTCAAGAGTTTTAACAAAGCCAAAGCCTCAAGCATTGCCTGAGAATGATTGGCAGAACCAAAAATCAGCCACAAAAGGCAAGAACACTAGCAGTGGAAAGTTGAGTTCCCGGGTCAACAAGCCTCCACAGACATCAATCAGAAACAAGCAAGAAGAGTCATTTATTACTCGTCCTCCATCAGCCACTAAAGCCAATGACATCAAAACCAAAAGCAAGAGAACTCATCCACTTTCAAGCAATCTTCTTAATAACCTCAACACGGTTCCAAATCTTCTCCCTGTCAAGACAAGACCTTCTCCTCAAAAACAGTCACAGGTACGTGATGGTGATGATGATGCTCGAGATGCAAAACGCAGCGCACAGTTATTTAGTAGTTCGGGCCTTTCGTACAAACAAGAAGCGCCACGACCACACTCACCCCGAGGAGGAACCACCAGCAGCGATGACGACAAATCTCACGGCACCTCCGCCACCACCACCGGCGCAGACGACGACGACGAAGGACCAGAATATCAGTACATCACAACCATCCTAACCCGTAGTACTACCACCACTGGGCCCCACAACAGCAACCTACCCCACCTCCAGTTTCAGTGGTTCTCTCCGACACACCCCTTGGACCCTTCCGTATTTCACCGTCTCGAGCACTACACAACATCCAATTCCTTTGTTTCCTTCCCCAGCGACAACAAAGATTGCATCTTTAAGCGGAAACAACATCTGGGTCCGCGCTGCAACCGTAGATTACTGTTCGATTTGGTCGATGAGTTGCTGTCGGAGATTCTTGTTCGGCCGAGGCGTTACAAAGGGGCGTTGTTGGAGACAGTGTGGGAGAGGGTTCGGAGTTTCCCACGTGCGAAGTGCGAGGTTTTGGAGGATATTGATGCGTTGATTGAGATGGAAGAGATGAAGAAAGATGAGGAAGGGGAAGGGTTGGTGAAGGAGATTGAGAGGAGCATGTTTGAGACGTTGGTGCATGAAACGTTTACCGTTATGGTTGGTGGCGTGGATACGAAGGGAAAGTGTTAA 2103 0.4593 MGKEWHWSGRSSKRGGGAETEIPSGCMCAMFQAFDFHPFHFSINQQQSSIKSPTPEDHTVLKGAEAPRSSLESETGTTVSSISKEENFKIPKNIRIKTRGSGTRSRTESFSDLSSEISASPGTKTPTLVARLMGLDLLPDAHSSSSPSLSTPNLHKPRQHIKIIKHRNSTGSNTLPETPRMSSGRRSDVEHRLSLQINKENNTVPFEDFESPRFSFSKRKYYENSCRSPSHYARQIVKQVKESVSRKVGLDITNTVKNREHGREESVGQFKFKKTPKTSVNESSPGKHSNSSYSPRLSRFIDTKHKPSTTPPSPTTPKNQNTHSILKPPSPTTSKNQNPHSILKPPSPPPVVNIETQLSRVLTKPKPQALPENDWQNQKSATKGKNTSSGKLSSRVNKPPQTSIRNKQEESFITRPPSATKANDIKTKSKRTHPLSSNLLNNLNTVPNLLPVKTRPSPQKQSQVRDGDDDARDAKRSAQLFSSSGLSYKQEAPRPHSPRGGTTSSDDDKSHGTSATTTGADDDDEGPEYQYITTILTRSTTTTGPHNSNLPHLQFQWFSPTHPLDPSVFHRLEHYTTSNSFVSFPSDNKDCIFKRKQHLGPRCNRRLLFDLVDELLSEILVRPRRYKGALLETVWERVRSFPRAKCEVLEDIDALIEMEEMKKDEEGEGLVKEIERSMFETLVHETFTVMVGGVDTKGKC* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2146 700 MobiDBLite consensus disorder prediction 370 423 - -
Gso10g2146 700 MobiDBLite consensus disorder prediction 1 20 - -
Gso10g2146 700 PANTHER DUF4378 DOMAIN PROTEIN 1 700 - -
Gso10g2146 700 MobiDBLite consensus disorder prediction 97 124 - -
Gso10g2146 700 MobiDBLite consensus disorder prediction 462 476 - -
Gso10g2146 700 MobiDBLite consensus disorder prediction 168 187 - -
Gso10g2146 700 MobiDBLite consensus disorder prediction 272 341 - -
Gso10g2146 700 Pfam Domain of unknown function (DUF4378) 528 685 IPR025486 -
Gso10g2146 700 MobiDBLite consensus disorder prediction 255 271 - -
Gso10g2146 700 Pfam DUF761-associated sequence motif 114 144 IPR032795 -
Gso10g2146 700 MobiDBLite consensus disorder prediction 365 527 - -
Gso10g2146 700 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 700 - -
Gso10g2146 700 MobiDBLite consensus disorder prediction 255 352 - -
Gso10g2146 700 MobiDBLite consensus disorder prediction 98 124 - -
Gso10g2146 700 MobiDBLite consensus disorder prediction 432 461 - -
Gso10g2146 700 MobiDBLite consensus disorder prediction 45 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2146 Gso-Chr10 48487063 48491163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2146 94 688 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 33.179 5.14e-51 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2146 - - gmx:102659931 1313.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2146 10 48487063 48491163 Gso10g2146 10 48487063 48491163 ECH
Gso20g1235 20 42357117 42362421 Gso10g2146 10 48487063 48491163 GST
Gso16g1603 16 36620758 36624925 Gso10g2146 10 48487063 48491163 PCT
Gso9g1225 9 35237677 35242047 Gso10g2146 10 48487063 48491163 PCT
Gso10g2146 10 48487063 48491163 Gso16g1603 16 36620758 36624925 PCT
Gso10g2146 10 48487063 48491163 Gso9g1225 9 35237677 35242047 PCT