Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2143 ATGGCCCCTCTGCCAGCAGAAAACATCTTACCAATCATTTTCCTCCTCTTGATAATATTTTCAGTATCCAAAGCTGAACTTCATGCTCATTACTATGACCAAACATGTCCACAAGTGGAAAAAATAATTTCAGAGACTGTTCTCAAAGCTTCTAAGCATGACCCAAAAGTCCCAGCCCGTATCTTGAGAATGTTCTTCCATGACTGTTTCATAAGGGGGTGTGATGCCTCAATATTGCTGGACTCAACAGCCACTAACCAAGCTGAGAAAGATGGCCCTCCTAATATCTCAGTTCGATCATTCTATGTGATTGATGAAGCCAAAGCAAAGCTTGAATTGGCTTGCCCACGCACTGTTTCTTGTGCTGATATAATTGCCATTTCAGCTAGCAATGTGGTAGCCATGTCTGGAGGTCCATATTGGAATGTACTGAAAGGAAGGAAAGATGGAAGAGTATCAAAGGCATCTGATACCATCAACTTACCCGCTCCAACCTCCAATGTGAGCCAACTAATTCAGAGCTTTGCTAAGAGAGGTTTGACAGTTAAAGATTTAGTAACTTTATCTGGAGGTCACACTCTAGGCTTTTCACATTGTTCTTCCTTTGAGGCACGTCTTCGTAATTTTAGTTCATTGCATGACACTGATCCAAGTATGAACACCGAGTTTGCTTTAGACCTAAGAAAGAAATGTCCAAAACCAAACCACAACCATAATGCAGGACAGTTCCTGGACTCAACGGCATCAGTGTTTGACAATGACTATTATAAACAACTGTTGGCTGGAAAAGGTGTGTTTTTTTCAGATCAATCACTTGTTGGTGATCACAGGACTAGATGGTTTGTTGAAGCATTTGTGAAAGACCAGAGCTTGTTCTTCAAAGAGTTTACAGCTTCAATGTTGAAACTTGGAAATTTAAGAGGCTCTAGAAATGGAGAAGTGAGACTTAATTGCAGGATTGTGAATTGA 969 0.4066 MAPLPAENILPIIFLLLIIFSVSKAELHAHYYDQTCPQVEKIISETVLKASKHDPKVPARILRMFFHDCFIRGCDASILLDSTATNQAEKDGPPNISVRSFYVIDEAKAKLELACPRTVSCADIIAISASNVVAMSGGPYWNVLKGRKDGRVSKASDTINLPAPTSNVSQLIQSFAKRGLTVKDLVTLSGGHTLGFSHCSSFEARLRNFSSLHDTDPSMNTEFALDLRKKCPKPNHNHNAGQFLDSTASVFDNDYYKQLLAGKGVFFSDQSLVGDHRTRWFVEAFVKDQSLFFKEFTASMLKLGNLRGSRNGEVRLNCRIVN* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2143 322 Gene3D Peroxidase, domain 2 162 303 - -
Gso10g2143 322 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g2143 322 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g2143 322 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g2143 322 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g2143 322 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g2143 322 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g2143 322 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g2143 322 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g2143 322 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g2143 322 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g2143 322 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g2143 322 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g2143 322 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g2143 322 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g2143 322 PANTHER PEROXIDASE 66 7 321 - -
Gso10g2143 322 Pfam Peroxidase 46 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g2143 322 ProSiteProfiles Plant heme peroxidase family profile. 26 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g2143 322 PANTHER PEROXIDASE 25-RELATED 7 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g2143 322 SUPERFAMILY Heme-dependent peroxidases 27 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso10g2143 322 Gene3D - 30 322 - -
Gso10g2143 322 CDD secretory_peroxidase 26 321 IPR033905 GO:0004601|GO:0042744
Gso10g2143 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2143 Gso-Chr10 48464311 48465948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2143 9 322 Peroxidase AT5G51890 70.476 4.50e-169 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2143 K00430 - gmx:100799516 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2143 10 48464311 48465948 Gso10g2143 10 48464311 48465948 ECH
Gso16g1602 16 36607628 36610634 Gso10g2143 10 48464311 48465948 PCT
Gso9g1224 9 35216452 35219260 Gso10g2143 10 48464311 48465948 PCT
Gso10g2143 10 48464311 48465948 Gso16g1602 16 36607628 36610634 PCT
Gso10g2143 10 48464311 48465948 Gso9g1224 9 35216452 35219260 PCT