Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2142 ATGGAAGTCAATCCCACCCACGACGGTGGCGATGACACCTCGGAAACGCCACTGCCGCCAATGGTGGACCCATCTCCGTCTCCGTCTCCGCAAATGAAAGAAGAGGTGATGGACGCGGAGCAAGGCGGTGACGTATCGCTTCCAATGAGCGTTGTTCCGGCGTCGTTGACAGTGTCAACTGAGGCAGCGGCGAAACGATCGTCGAAGGACCGGCACACGAAGGTGGAGGGACGCGGCCGGAGAATCCGTATGCCGGCGACGTGCGCGGCGAGGATCTTTCAGCTGACGCGGGAACTGGGACACAAGTCCGACGGAGAAACAATCCGGTGGTTGCTGGAGCACGCAGAGCCGGCGATCATCGAGGCCACCGGAACCGGCACCATACCGGCGATCGCGGTCTCGGTCGGCGGCACACTCAAGATTCCGACATCCTCGGAAGCGAGAGCCCAGGGAGAAGAAGACACTCCGAAAAAGCGAAGGAGAAGAGCATTAAAGAGCGAATTCATCAACCTGAACGAAAACCAGGTTTCGGTGTCTTCAGGGCTGGCACCAATCGCACAAAGCAGCGCATATGGAAGTGGTGGTGGTGGACTTGTTCCTCTGTGGCATGGTAACGGTGCTGCTGCTGGGCCTTTCTTCGTGTTTCCGAACGCTTCAAACCCACCTCAGTATTGGGCCATTCCGGCAACCGCGGCCCCGTTTTTCAACGTCCAGGCCCGGCCCATTTCGGGGTTCGTTTCCGCCTTGCAGATGCAACATGATAACCACCACCACTCTTTAATAAACGCTGCTGCCTCGGGTTCTGTTAAATCTTCGTCCACTGTGAGTGTCACTAGCAGTGCTGCTTCCACTCAAATGCTCAAGGATTTCTCCTTCGAAATTTATGACAAGAAAGAGCTTCAATTTTTAGGTCAACCACCACCACCCTCTTCATAG 936 0.5609 MEVNPTHDGGDDTSETPLPPMVDPSPSPSPQMKEEVMDAEQGGDVSLPMSVVPASLTVSTEAAAKRSSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGTIPAIAVSVGGTLKIPTSSEARAQGEEDTPKKRRRRALKSEFINLNENQVSVSSGLAPIAQSSAYGSGGGGLVPLWHGNGAAAGPFFVFPNASNPPQYWAIPATAAPFFNVQARPISGFVSALQMQHDNHHHSLINAAASGSVKSSSTVSVTSSAASTQMLKDFSFEIYDKKELQFLGQPPPPSS* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2142 311 MobiDBLite consensus disorder prediction 1 47 - -
Gso10g2142 311 MobiDBLite consensus disorder prediction 59 78 - -
Gso10g2142 311 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 47 306 IPR005333 GO:0003700
Gso10g2142 311 ProSiteProfiles TCP domain profile. 68 122 IPR017887 -
Gso10g2142 311 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 47 306 - -
Gso10g2142 311 Pfam TCP family transcription factor 67 153 IPR017887 -
Gso10g2142 311 MobiDBLite consensus disorder prediction 64 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2142 Gso-Chr10 48456213 48457683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2142 16 303 TCP Transcription Factor Family AT5G51910 51.495 2.18e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gso10g2142 TCP 2.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2142 - - gmx:100816220 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2142 10 48456213 48457683 Gso10g2142 10 48456213 48457683 ECH
Gso20g1238 20 42405097 42407314 Gso10g2142 10 48456213 48457683 GST