Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2126 ATGGATGGGGATCAAAACGAGTTGGGTACTGTGGGTGAAGGGAATGTTGATATTGGACCTCAGACGTTGAATAACTTGGACTTGAATGTGGAGCAGAACTGTTGCAGCTCAAATGTTGCTCACGCTAGTGACACTCAATCCTGTCATCCTTCTTCAGCAAATGTACTTAGCGGTGATACTGTATTGGGAATTGGTACGGAATTTGAGTCCGATGATCATGCATACCAATTCTATAACAAGTATGCCAGATTGTTGGGTTTCAATGTTAGAAAAGATTGGATAAATAGGAGTAAGGTGCATGGTCAAGTGGTGTCTAGGAAGTTTACTTGCTCCAAAGAGGGATATCGCAGGAAAGACAAAAGAGATGCTAATGTGAAGAAACATAGGAAGGAAACGAGATCTGGCTGCTTGGCACATATGATTGTCACTCGGCAACCAGATGGTAAATACCAGGTCACCCATTTTGAAGCACAACATAATCATGACAATATAAACTCTAACTCTAACAGTGCTAACATGTTAAACTTGCAAAATGAATTTAGTGTTGCTCAAGCTGTGGAAGCTGACTCAAACAATAGTTTGGGACCTAAATCAAAGTCAGCACTAGATGTGTTGAATAAAAAAACAAGTGCCCGTGAATCTCTTGATCTACTTTCAATGAATTATGATAATTACCTTCATTATGCGAGGGAAAGAGATATGAAGGAAGGAGAAGCAGGGCGTTTGCTTGGTTACTTCCAAAGGCAACACTTTGAAAATCCAACATTTTTTTATGCCATACAGCTTGATGTTGATGACAAGGTTAGCAATATTTTTTGGGCTGATGACAATATGGTGGTGGATTATGAACATTTTGGTGATGTAATTTGTTTGGATACAACTTGCAGAACAAACAAAGATCTTCGGCCATTTGTACAGTTTTTAGGTATTAACCATCACAGACAAGTGTTAATCTTTGCTGCTGCTTTTCTGTATGACGATTCCATTGAATCATATAATTGGCTATTTCGAACTTTCATTAGTGCAATGTCTGGGAAAAAGCCAAAGACCATTCTCACAGAACAAGAAGCTGTAATTATTGAAGCCATCAATACGGTTTTATCTCACACAAACCATTGTACATGTGTATGGCAGTTGTATGAGAACACTTTGAAACACCTCAGCCATGTTGTTAAAGATGCTGAATCTTTTGCAAACGATCTAAGGAGAAGTATTTATGACCCCAAGGATGAGGAAGAATTTACTCATGCTTGGGAGGCTATGCTGGAGAAGTATAATCTCCAGCAAAATGAATGGCTGAGATGGATTTATAGAGAAAGAGAGAAATGGGCTGTTGTCTTTGGTCAGAATACATTTTTTGTAGACATCAAAGGCTTTCATTTAGGTGAGATTTTGTCTAAAAAATTTAGAAATTATCTAAATCCTGACCTTGATGTGCTTCAATTTTTTAAGCATTTTGAAAGGGTAGTAGATGAGCAGCGTTACAAAGAAATAGAAGCTAGTGAGGAAATGAGCAGGTGTTTGCCAAGGCTAATGGGTAATGTGGTTTTGTTGAAGCATGCAAGTGATATTTATACTCCAAGAACATTTGAAGTATTTCAGCGAGCATACGAGAAGTCTTTAAATGTTCTTGTTAACCAACACAGTAGAAATGGATCATTGTTTGAGTACAAAGCAAATACATTTGGGCATACTAGACAATACAATGTCACCTTCAATTCTTCTGATGACACAGTTGTCTGCAGTTGTATGAAGTTTGAGCGTGTTGGTATTCTGTGTAGCCATGCACTAAAAGTTCTTGATCATAGAAACATAAAAGTAGTTCCATCTCGGTACATCTTGGATAGATGGACAGGACATGCAAGGTTGGGAAATCTTAGGGAGATTAGGCAATGTAAAATGCAAGATAATCCTAACATGGTTGTCACAAGCTGTTACAAAGATTTGTGCAACAGACTGCTCAAGTTATCAGCAAGAGCCTCTGAATCTATGGAGGCTTATCAGTTTGCCGCAAGGCAACTTGATGAAGTGATGATAGGAGTGGAGAAAATCTTGACATTAAAAGTTGAGCAACGTCAAGTTATCACCTCAAGTAATATTGATGCAAATGCTTCAGAAAATGAGCCTGCAGAGATCTTTCTGAATGGACATTCAATTGAGGATCAGGATGAAAGTAACAGAGCAAATGGAGGAAAAGACAGGAGAGCTACATCAGATAGGGGCTATCTAACAACCATGACTTGTAATGGAGCTGATTCTGATAGGATTTTGAATGTAGAAGTATCTCCACCAAATACCGTTGTATGCATTTCAAGCCCCTCGTCTGCATATGTTTCATCTCATTCTGCAACACCAAATCCCATTCTGCAGGGTTTGTACGGTTTTGAAGCCAATCAAGTGGTTCACTGCATGTATGAACAGACTAATCATGTGCTCGACCATCAATCTAATTCTAACACCTTACAACCACCAAACATCTTTTCTAACCAACAGGATTCTCCTGGTCAATCTCAGCTGCTGCAGGAGCCTATAATCCAGAGCACATACCATGCGTCCATGCTCAGCAATAATCAGATGTGA 2580 0.3895 MDGDQNELGTVGEGNVDIGPQTLNNLDLNVEQNCCSSNVAHASDTQSCHPSSANVLSGDTVLGIGTEFESDDHAYQFYNKYARLLGFNVRKDWINRSKVHGQVVSRKFTCSKEGYRRKDKRDANVKKHRKETRSGCLAHMIVTRQPDGKYQVTHFEAQHNHDNINSNSNSANMLNLQNEFSVAQAVEADSNNSLGPKSKSALDVLNKKTSARESLDLLSMNYDNYLHYARERDMKEGEAGRLLGYFQRQHFENPTFFYAIQLDVDDKVSNIFWADDNMVVDYEHFGDVICLDTTCRTNKDLRPFVQFLGINHHRQVLIFAAAFLYDDSIESYNWLFRTFISAMSGKKPKTILTEQEAVIIEAINTVLSHTNHCTCVWQLYENTLKHLSHVVKDAESFANDLRRSIYDPKDEEEFTHAWEAMLEKYNLQQNEWLRWIYREREKWAVVFGQNTFFVDIKGFHLGEILSKKFRNYLNPDLDVLQFFKHFERVVDEQRYKEIEASEEMSRCLPRLMGNVVLLKHASDIYTPRTFEVFQRAYEKSLNVLVNQHSRNGSLFEYKANTFGHTRQYNVTFNSSDDTVVCSCMKFERVGILCSHALKVLDHRNIKVVPSRYILDRWTGHARLGNLREIRQCKMQDNPNMVVTSCYKDLCNRLLKLSARASESMEAYQFAARQLDEVMIGVEKILTLKVEQRQVITSSNIDANASENEPAEIFLNGHSIEDQDESNRANGGKDRRATSDRGYLTTMTCNGADSDRILNVEVSPPNTVVCISSPSSAYVSSHSATPNPILQGLYGFEANQVVHCMYEQTNHVLDHQSNSNTLQPPNIFSNQQDSPGQSQLLQEPIIQSTYHASMLSNNQM* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2126 859 Pfam MULE transposase domain 288 382 IPR018289 -
Gso10g2126 859 SMART 26again6 579 606 IPR006564 GO:0008270
Gso10g2126 859 ProSiteProfiles Zinc finger SWIM-type profile. 568 604 IPR007527 GO:0008270
Gso10g2126 859 MobiDBLite consensus disorder prediction 717 738 - -
Gso10g2126 859 Pfam FAR1 DNA-binding domain 76 162 IPR004330 -
Gso10g2126 859 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 9 752 - -
Gso10g2126 859 MobiDBLite consensus disorder prediction 716 738 - -
Gso10g2126 859 MobiDBLite consensus disorder prediction 814 837 - -
Gso10g2126 859 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 752 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2126 Gso-Chr10 48273389 48277566 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gso10g2126 MULE 5.7e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2126 - K17604 gmx:100809803 1717.59