Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2125 ATGGGCTTTCTCCGGCGACTTTTCGGCGCCAAAAAACCCTCCGATTGCAAATCCGGCAAGAAAAGATGGACCTTCCTCAAACACACCGTCAGAAACAAGTCACTCCCGCCGCCACCGATACCCCCCGCACTCAACACTCACTTTGATTCCTCAACTCCCTTGGATGCCAACAAGCATGCAATCGCCGTCGCCGCCGCCACCGCCGCAGTAGCAGAAGCTGCTCTCGCCGCCGCCCACGCCGCTGCCGAGGTAGTCAGACTCACAAGCGGCGGCGTCGCCGCCACAAGTACCAGCTCCAGAACCGTTGTCACGGCGGCGCGTGTTGGCAACCTTGAGACCGCCGCCGTTAGGATACAATCGGCGTTCCGTGGTTACTTGGTCCCTGAAGAATATGAGCACCCACCTCGTGGCTTCAGTACAAAATTTGATGGATCTTCTATCCTTAAGAGATGCAGTTCCAATGCTAATTCTAGGAATGTTGACTCGGAACGAGTCGGGTTCGATTCCAACTGGTTAAACCGTTGGATGGAATTAGATAACAAGTGTAGCCAAACTGGAGATGCTTCATTGAAAAATAATGGACGCCCTGATGATGATAAAAGTGACAAGATTCTCGAAGTGGATACTTGGAGGCCACACTTCAAGTCCCACCACAACAGTGGCAGCTCCTCTCAAGCAGCACATTATTATCTGAATGCTGATTACAATAATGAGAACTTTGCGGCGGCACACGAGTCTCCATCAAAACGTTCAGCAAAGGCTCTAAACCAAAGCTTCTCATCAAGGGAGGTGTTGCAGCTAAGATCATTGAAGTTTCACAAAGGAAAAGAAGAAGCAAGTTCAAGAACTGCTGACAATAGTCCACAAGCATTTTCTGCCAATTCTAGAAACGGAAGTGGTGCAAGGAGAGGAGGAGGACCCTTTACACCTACTAGGAGTGAGTGTTCGTTGGGTTTCTTCAGTGGCTACACGGGTCACCCCAATTACATGGCAAACACTGAATCTTTTAGAGCTAAGGTTAGATCACAAAGTGCACCTAGACAAAGGCTGGAGTTTGACAGATACGGTTCCACTAGGAGGCCTGTTCCTTTGGTGGGGCCTAATTCAGACCATGATTCAGATTTAAGGAACAAAGTCTTACCTCCGTTTAACCAAACGAACAGAATTGGGAGTAGCAATTTAAGGTGA 1188 0.4924 MGFLRRLFGAKKPSDCKSGKKRWTFLKHTVRNKSLPPPPIPPALNTHFDSSTPLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGGVAATSTSSRTVVTAARVGNLETAAVRIQSAFRGYLVPEEYEHPPRGFSTKFDGSSILKRCSSNANSRNVDSERVGFDSNWLNRWMELDNKCSQTGDASLKNNGRPDDDKSDKILEVDTWRPHFKSHHNSGSSSQAAHYYLNADYNNENFAAAHESPSKRSAKALNQSFSSREVLQLRSLKFHKGKEEASSRTADNSPQAFSANSRNGSGARRGGGPFTPTRSECSLGFFSGYTGHPNYMANTESFRAKVRSQSAPRQRLEFDRYGSTRRPVPLVGPNSDHDSDLRNKVLPPFNQTNRIGSSNLR* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2125 395 Pfam Protein of unknown function (DUF4005) 287 350 IPR025064 -
Gso10g2125 395 PANTHER IQ-DOMAIN 5-RELATED 143 393 - -
Gso10g2125 395 PANTHER IQ-DOMAIN 5-RELATED 1 126 - -
Gso10g2125 395 PANTHER CALMODULIN-BINDING PROTEIN 1 126 - -
Gso10g2125 395 PANTHER CALMODULIN-BINDING PROTEIN 143 393 - -
Gso10g2125 395 MobiDBLite consensus disorder prediction 273 310 - -
Gso10g2125 395 ProSiteProfiles IQ motif profile. 111 140 IPR000048 GO:0005515
Gso10g2125 395 MobiDBLite consensus disorder prediction 282 299 - -
Gso10g2125 395 MobiDBLite consensus disorder prediction 379 395 - -
Gso10g2125 395 MobiDBLite consensus disorder prediction 339 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2125 Gso-Chr10 48265254 48270123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2125 197 352 IQD Protein Family AT5G62070 39.130 5.23e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2125 - - gmx:102668067 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2125 10 48265254 48270123 Gso10g2125 10 48265254 48270123 ECH
Gso20g1251 20 42568881 42573579 Gso10g2125 10 48265254 48270123 GST
Gso16g1577 16 36312382 36318141 Gso10g2125 10 48265254 48270123 PCT
Gso9g1187 9 34173855 34179437 Gso10g2125 10 48265254 48270123 PCT
Gso10g2125 10 48265254 48270123 Gso16g1577 16 36312382 36318141 PCT
Gso10g2125 10 48265254 48270123 Gso9g1187 9 34173855 34179437 PCT